Coffea arabica (coffee): 140009277
Help
Entry
140009277 CDS
T11342
Name
(RefSeq) probable DNA helicase MCM8 isoform X1
KO
K10737
DNA helicase MCM8 [EC:
5.6.2.4
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carb03032
]
140009277
03400 DNA repair and recombination proteins [BR:
carb03400
]
140009277
Enzymes [BR:
carb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
140009277
DNA replication proteins [BR:
carb03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
140009277
DNA repair and recombination proteins [BR:
carb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
140009277
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
WHD_MCM8
MCM_OB
MCM_lid
Mg_chelatase
AAA_5
AAA_3
Sigma54_activat
AAA_16
nSTAND_NTPase5
MCM8_N
FtsK_SpoIIIE
AAA
AAA_29
MCM_N
AAA_7
Motif
Other DBs
NCBI-GeneID:
140009277
NCBI-ProteinID:
XP_071910486
UniProt:
A0ABM4ULN8
LinkDB
All DBs
Position
6e:complement(2628060..2640097)
Genome browser
AA seq
800 aa
AA seq
DB search
MYGHQENTRNSKNQRWTVTDDLANILALYFPQIDISLEASKFKLQLASELVRFFSAPIGQ
TIVSQVKNDDGLCFLSLDFQLLKSICQIKELYGAMEENPKDALLCLSAAVHKVLMMKWDS
NMMEEFVKINIRLHNYPESLIALKNLKAAYIDRLVSVHGTVVKVSTVRPLVRQMCFVCTK
CGTNITCNFPDGKFSPPSICVIQGCRSRSFDPLRCTARPIDFQKIRLQELLKNEHHEEGR
VPRTVECELTEDLVDACIPGDVVTVTGIIRMINNYMDIGGGKSKGKNQGLYFLYLEVVSI
KNLKSQSLPEDLQDAKVDARTTQLSDLFSFSPRDLEFIVKFSEEYGSDVFRQILQSICPS
IYGHELVKAGITLALFGGVQKHSMDQNKVPVRGDIHVLIVGDPGMGKSQLLQAAASISPR
GIYVCGNATTNAGLTVAVVKDHMTSDYAFEAGAMVLADRGLCCIDEFDKMSAEHQALLEA
MEQQCVSVAKAGLVASLSARTSVLAAANPAGGHYNRAKTVNENLKMNAALLSRFDLVFIL
LDKPDELLDKRLSEHIMSLHTGNGQNSPAAKRLCRASQRIKCINLTLRSHSLAARLRLDP
KDSDFVPLPGPLLRKYIAYAKTYIFPRMTRPAAEILQRFYLQLRDHNTSADGTPITARQL
ESLVRLAEARARVDLRDEITVQDAMDVVEIMKESLYDKYVDEHGLVDFGRSGGMSQQKEA
KRFLSALNKQSELQQKDCFTISSFVQELYSLADRIALRVPDIDTFVENLNSVGYLLKKGP
KTYQVLSSSYSHSQSSRARG
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgtacggacatcaagagaacaccaggaactcgaagaatcagcgatggacggtgacggac
gacctcgccaatatccttgccctgtatttcccccaaatcgacatctctctggaggcttcc
aagtttaaactccaactcgcctccgaactcgtccgattcttctctgctccaatcggccag
accatcgtctcacaggtaaaaaatgatgatggtttatgcttcttatcgctcgacttccag
ctgttaaaaagcatttgtcagattaaagaactgtatggagcaatggaggaaaatcctaaa
gatgccctgttgtgcttgagtgctgcagtgcacaaggttttaatgatgaaatgggacagc
aatatgatggaggaatttgtaaagataaatatccgtctccacaactatcctgaatcgttg
attgcattgaagaacttaaaagctgcttatattgacaggcttgtatctgtacatggtact
gttgtaaaagttagcacagtcaggcctctggttagacaaatgtgctttgtctgtacaaag
tgtggaaccaacatcacttgcaactttcccgatggaaaattttcacctccttcaatctgt
gtaatccaaggttgcagaagtaggagttttgatcctttaagatgtactgctcgaccaata
gactttcagaaaataagacttcaggaactgctgaagaatgaacatcacgaagaaggaagg
gtgcctaggactgttgaatgcgagttgaccgaagaccttgtagatgcatgtatccctggg
gacgtcgtgacggtgactggtattatcaggatgatcaacaattacatggatattggggga
ggaaaatcaaaaggcaagaatcaaggactatattttttgtacctagaagttgtttcgata
aaaaatttgaaatctcaatcattaccggaggatttgcaagatgctaaagttgatgctaga
acaacacagctgtctgatttattctcattttctccaagagatttggaatttattgtgaag
ttttctgaggaatacggttcagatgtctttaggcaaatacttcaatctatttgcccgtca
atctatgggcatgaacttgtgaaagcgggaatcacattagcattgtttggaggggtgcag
aagcattcgatggatcagaataaggtgcctgtcagaggtgacatccatgtactgattgtt
ggtgatcctggaatgggaaaaagtcaactactccaagcagcagcttctatttctccacgt
ggcatatatgtatgtggtaatgcgacaactaatgcaggcctaactgttgctgtggtgaag
gatcatatgacaagtgactatgcttttgaggctggtgcaatggtacttgcagatcgtgga
ttatgctgtattgatgagtttgacaaaatgtcagcagaacatcaggctctattggaagct
atggaacaacagtgtgtctctgttgcaaaggcaggacttgtggcaagtttatcagcccga
acatctgttttagctgccgcaaaccctgctgggggtcattataaccgcgctaaaactgtg
aatgagaacttgaagatgaatgctgctctcttgtcaagatttgatctagtttttatatta
cttgacaagcctgatgaactactggacaagcgcctttcagagcacattatgtcacttcat
actggaaatggacaaaattcaccagcagctaaaaggctttgcagagcatcacaacgtatc
aaatgcatcaatcttactttaagaagccattctctagctgctaggttgaggcttgatcca
aaggacagtgattttgttccattgcctggtcctcttctccgtaaatacattgcttatgca
aagacatatatcttccctaggatgacaagaccagctgctgaaatcctgcagaggttttat
ttgcaattaagagaccataacacatctgctgatggtacaccaataacagcaaggcaatta
gaaagtctagtaaggctggcagaagctcgagctagggtggatttaagagatgaaataacc
gttcaagatgccatggatgttgtggaaataatgaaagaatctttgtatgataagtatgtt
gacgaacatggccttgtggattttgggcgaagtggtggaatgagccaacagaaagaagca
aaacggtttttaagtgccttaaacaagcaatcagagttacagcaaaaggattgctttact
atatcctcttttgttcaggaattatacagcctggcagacaggattgccttaagggttcca
gatatagacacttttgtggaaaatctaaacagtgttggttatttgctaaagaaggggcct
aagacatatcaggtgctgtcatcgtcttattcacacagtcagtcatcaagagcaaggggc
taa
DBGET
integrated database retrieval system
