Coffea arabica (coffee): 140009290
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Entry
140009290 CDS
T11342
Name
(RefSeq) zinc finger protein JACKDAW-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
140009290
Transcription factors [BR:
carb03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
140009290
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
140009290
NCBI-ProteinID:
XP_071910515
UniProt:
A0ABM4UTA3
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Position
6e:2820884..2823734
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AA seq
551 aa
AA seq
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MLVMSANMFTVPPSVNGFSPEPADTNPTSSTSNPKSNSTTTNPAGKKKRNLPGNPDPDAE
VMALSPKTLMATNRFICEICNKGFQREQNLQLHRRGHNLPWKLKQRTTKEPVKRKVYICP
EKTCVHHDPSRALGDLTGIKKHFSRKHGEKKWKCEKCSKKYAVQSDWKAHSKTCGTREYK
CDCGTLFSRKDSFITHRAFCDALAEESARITSVAANNFNFKTDQQHLNGGALLNHPGSFP
HGLSGPTGISQIGVDFATGNQLKPRLSLWLDQASNHQLNHADMPPSQNLYMPSASHHDIM
QMSSAADVFGNYGMPWQQLEKSSAPPSSAPSSSAANLSLSPMMPQQVLKDEGAGGSINTQ
TLSSLYSPGAASNNDISHSKSSATPMSATALLQKAAQMGSSKSTAAIFGNGFGIMNPSSS
SSSPAAAANMIAFSSGLAQNRTEMMQVFGKQTDNMMGGGSNMTSSTSSTLTNNLDHQPMV
QTSTAADSQSVASLGGFHRHPGFNAVVEHASLTRDFLGMGGDGGRPFLPHELAKFASMSS
AMGLGHFSSNH
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgctagtcatgtctgcaaatatgtttacagttcccccttcagtcaatggcttttctcca
gagccagctgatacgaaccctactagcagtacttccaatcccaaatccaactccaccacc
actaacccagctggcaaaaagaagagaaatctaccaggaaacccagatccagatgctgaa
gttatggctctctcgcccaagacccttatggcaacgaacagattcatatgcgaaatttgc
aacaagggtttccaaagagaacaaaacttgcagcttcatagaagggggcacaatcttcca
tggaagcttaaacaaaggactactaaagagccagtgaagaggaaggtgtacatatgccca
gaaaagacatgcgtccaccacgacccgtctcgagcactcggggacctcaccgggataaag
aagcatttcagcaggaagcacggggagaagaagtggaagtgtgagaaatgttcaaagaag
tacgcagttcaatcggactggaaagctcattctaagacttgcgggactagagagtataaa
tgcgactgtggaacgctcttttccagaaaagacagctttatcacgcatagagctttctgc
gatgccttagctgaagaaagtgcaagaattacttctgttgcggccaataatttcaacttc
aaaactgatcagcagcatttaaatggtggtgctctgctaaatcatccgggtagttttcct
cacggactgagcggtccaactgggatttcacaaattggggtagactttgcaactggaaat
cagctcaagcctagactttcattgtggttggatcaagctagcaatcatcagctcaatcac
gctgatatgcccccaagccaaaatctctacatgccctcggcttcacaccatgacatcatg
caaatgtcgtcggccgctgatgtctttggcaattatggcatgccttggcagcagctggaa
aagagtagcgcaccaccgtcatcagcaccatcgtcttccgcagcaaatctctccttatcg
ccgatgatgccccaacaagtcttaaaggatgaaggagccggaggcagcattaatacccaa
accctttcttctttgtactcgcctggtgctgccagtaacaatgatatcagtcattcaaaa
tcttcggcgacgccaatgtcggccactgcccttctccagaaggcagctcagatggggtca
tctaaaagcaccgcagcaatcttcggcaatggcttcggcataatgaacccctcctcttcg
tcgtcttctcctgctgctgctgctaatatgattgcttttagcagtggtttagcgcaaaat
aggacagagatgatgcaggttttcgggaagcaaacggacaatatgatgggcgggggttcg
aatatgacttcgtcaaccagttccacgttaaccaataatctggatcatcagcccatggtg
caaaccagtactgccgcagacagccaatctgtggcttccttgggcggttttcatcgtcac
ccgggattcaatgcagtcgtcgaacacgcaagtctaaccagagattttctgggaatggga
ggagacggcggacgtccattcttgccacacgagcttgctaaatttgcctcaatgagttca
gccatgggtttggggcatttcagtagcaatcactag
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