Coffea arabica (coffee): 140009437
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Entry
140009437 CDS
T11342
Name
(RefSeq) polyprotein of EF-Ts, chloroplastic-like isoform X1
KO
K02357
elongation factor Ts
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
140009437
03029 Mitochondrial biogenesis [BR:
carb03029
]
140009437
Translation factors [BR:
carb03012
]
Eukaryotic type
Elongation factors
140009437
Prokaryotic type
140009437
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
140009437
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EF_TS
S1
EF-Ts_N
S1_RRP5
RNase_II_C_S1
DUF2859
Motif
Other DBs
NCBI-GeneID:
140009437
NCBI-ProteinID:
XP_071911012
UniProt:
A0ABM4UUP9
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Position
6e:complement(8176986..8184011)
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AA seq
1215 aa
AA seq
DB search
MTPVLPSSPSNNLVNPGNALINRKDTFLTRCSFLRKSRKQGLLSQRYTLPMSTSFRLFPQ
FRMGCALQPKLRGHIVLATQTDVAVEETDLPGADKDTGEVSESPLDAIETNEDSSAKSDG
SSTTARSKRTRPVRKSDMPPIRTEDLIPGATYTGKVRSIQPFGAFVDFGAFTDGLVHVSR
LSDGFVKDVGDVVSVGQEVTVRLVEANTETGRISLTMRESDDPTKPQKQRDTPAGTSRAP
RKSNQRRDEVKRSSKFVKGQELDGTVKNLVRAGAFISLPEGEEGFLPTSEEADEGFGNFT
GGSSLQVGQEVKVRVLNINRGKVQLTMKKEETAGEFDLVQGVVHTATNPFVLAFHRNKDI
ATFLDEQDKTVKPTEPSQDTVLNTDATVNIADNAEATEKSEDQESLHEPEGSFEILSPEG
STSATIDTVDEAQTLGKYEDQENIIADSLRGVDSAVQNVGDEPEASSDVLAAAGSTSTID
PITDVLPATEKVEDGEKSELSGIVSGQISSSENLIGQEAQEDESKKKDVTVKDELQTETP
IGNEEFISAAKDAEEIVAPNPEIDGGIASSESLIGGEGTEDEVKDVTVKDQVQTEAPVEK
QKVISASKNEEEIVAPNPEINTGVASAGEKEGLIGEEGGPEDEVKDVAVKDEVQTEAPIE
KEEVISASKNEEEIVAPNPEINGGISSSGTPEEESAVNEVTENISVSVADAVQAESPLSE
TEPLSGTTVITEQVGPDSTKNGNVADLSEQSSTPSQKEATTKAAISPALVKQLREETGAG
MMDCKRALSEMGGDMVKAQEYLRKKGLASADKKASRTTAEGRIGSYIHDSRIGILIEVNC
ETDFVSRGDIFKELVEDLAMQVAACPQVQYLAADDVPKEIVDKEREIEMQKEDLLSKPEQ
IRLKIVDGRIRKRLEELALLEQPYIKNDKMVVKDWVKQTIATIGENIKVKRFVRYNLGEG
LEKKGQDFATEVAAQTAAKPTEPKKEQPVTVEAKETVDKPVKATISPALVKQLREETGAG
MMDCKKALSETGGDLEKAQEYLRKKGLSSAEKKSSRLAAEGRIGSYIHDSRIGVLIEVNC
ETDFVGRGEIFKELVDDLAMQVVASPQVQCVSVEDIPATIVNKEKELEMQREDLQSKPEN
IREKIVEGRVSKRLGELALLEQPFIKNDSMLVKDLVKQTVASLGENIKVRRFVRFTLGQE
SKPELGEEAAAAVKE
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgacacctgtgcttccaagttcacctagcaataatttagttaatccgggaaatgcctta
ataaacaggaaggacacgtttcttaccagatgcagtttcttacggaaatcaaggaaacaa
ggtttgctttcacaaagatatacgttacctatgtccacatctttcaggttatttccacag
tttaggatgggatgtgctttacaacctaaattgaggggccatatagtattggcaacccag
actgatgtagcagtagaagagactgatttgcctggagctgataaagatactggtgaagtc
tctgaaagtccattagatgctatagaaacaaacgaagattcctctgctaaatcagatgga
agctccactactgctcgatctaagcgaacaagacccgttaggaagagtgacatgcctcct
atcaggactgaggatttgattcctggtgcaacttataccggaaaagtaagatcaattcag
ccatttggcgcttttgttgattttggtgccttcacggatggccttgtgcatgtttctagg
ttgagtgatggttttgtgaaggatgttggtgatgtcgtctctgttggacaagaggtgaca
gtaagattagttgaagcaaacacagaaacaggaagaatctctcttacaatgagggaaagt
gatgatcctaccaaaccccagaagcagagagacacccctgctggtacctccagagctccc
agaaagtccaaccaaaggcgggatgaggtgaagagaagctcaaagtttgttaaagggcaa
gaacttgatggcactgttaaaaatttagtcagagctggtgccttcatatctctaccggaa
ggggaggaaggtttcctgcccacatcagaggaagctgatgaaggttttgggaactttaca
ggaggatcttcactccaagttggacaagaagtgaaagttcgtgtgttaaacatcaataga
ggaaaggtacaattgacgatgaaaaaagaggaaactgctggagagtttgacttagtgcag
ggtgttgtccatactgcaaccaacccctttgtattggctttccatagaaacaaagatata
gccacatttttggatgagcaagacaaaacagtgaaaccaaccgaaccatcacaggatact
gtactcaatacagatgccacagtcaacattgcagacaatgctgaagccacagaaaaaagt
gaggatcaagaaagcttacatgaaccagaaggaagctttgagatattgtcccctgaaggt
agcacatctgccactattgatacagtagatgaagctcaaactttgggcaagtatgaggat
caagaaaatataattgctgattctttgagaggggttgatagtgcggtacaaaatgtcggt
gacgaacctgaagcaagctctgatgtattggctgctgcaggtagcacatccaccatagat
ccaataactgatgtgcttcctgccacagagaaagtagaagatggtgaaaaatctgagcta
tcaggaattgtatctggtcaaatttcatcatcagagaatttgattggtcaggaggctcaa
gaggatgaatctaaaaagaaagatgtgacggtgaaagatgaactacaaaccgagacacct
attggaaatgaagaattcatttctgctgcaaaagatgcagaagaaatagtggcacctaac
ccggagatagatggtggtattgcaagctcagagagtttgattggtggggaaggtacagag
gatgaagtcaaagatgtgactgtgaaagatcaagtacaaactgaggcacctgttgaaaag
caaaaagtcatttctgcttcaaaaaatgaagaagaaatagtggcacctaacccagagata
aatactggtgttgcaagcgcaggtgaaaaagagggtttgattggtgaggaggggggtcca
gaggatgaagtcaaagatgtggctgtgaaagacgaagtacaaactgaggcacctattgaa
aaggaagaagtcatttctgcttcaaaaaatgaagaagaaatagtggcacctaacccagag
ataaatggtggtatttctagctcaggtactcctgaagaagaaagtgcggtcaatgaagtc
actgagaatatcagtgtgagtgtagctgatgcagtgcaggcggagagtcctctttcagaa
actgaacctttgtctggtacaactgttataacagaacaggtagggcctgattcaaccaaa
aacggaaatgttgcagacttaagtgagcaaagtagtacgccttcacaaaaagaagcaacc
accaaagctgctatatcacctgctcttgtgaagcagttgcgtgaagaaactggagcaggt
atgatggattgcaagagagcactttcagaaatgggaggagatatggttaaagctcaggaa
tacctcagaaagaaagggttagcaagtgcagataagaaagccagccggactactgctgaa
ggaagaatcgggtcatacatccatgatagtaggattggcatcttgatagaggtgaactgt
gagactgactttgtgtcaaggggtgacatctttaaggaattagttgaagacttggccatg
caagtggctgcatgccctcaagtacagtatcttgctgcagatgatgttcccaaggagata
gttgataaggaaagagaaattgaaatgcagaaagaagatctactttcaaaacctgagcag
atcaggttaaagattgttgatgggcggatcaggaaaaggctcgaggagctggccttattg
gagcagccctacattaagaatgataaaatggtggttaaagattgggtgaagcagactata
gcaacaattggtgaaaatataaaggtcaaaagatttgtacgctacaacctgggagaaggt
ttggaaaagaaaggccaagattttgccacagaggtagctgcccagactgcagcaaaacca
actgaaccaaagaaagagcagcctgtcaccgttgaagccaaggaaacagttgacaagcct
gtaaaagcaacgatctcaccagcactggttaaacaattgcgagaagaaactggagcaggt
atgatggactgcaagaaagccctctctgaaacgggtggagaccttgagaaggcacaagag
tatctgaggaagaagggtctgtcttctgctgaaaagaagtctagcaggcttgcagcagaa
ggtaggattgggtcctatattcatgattctcgcattggggttctcatcgaagtcaactgt
gaaactgacttcgtgggtagaggagaaatttttaaggaattagttgatgacctagcaatg
caagttgtggcaagtccacaggtgcagtgtgtatctgttgaagatattccagcaaccatt
gtcaataaggaaaaagagttggagatgcagagagaagaccttcagtccaaacctgagaat
ataagagagaaaatcgtcgagggaagggtatcaaagaggcttggtgagcttgcccttcta
gagcaacctttcataaaaaatgacagtatgttggtcaaggacttggtaaagcaaactgtg
gcatctcttggcgagaacataaaagtaagacggttcgttcgatttactcttggccaggaa
agtaaaccagaattgggtgaagaggcagctgctgcagtaaaagagtga
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