Coffea arabica (coffee): 140009647
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Entry
140009647 CDS
T11342
Name
(RefSeq) presenilin-like protein At1g08700
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
140009647
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
140009647
Peptidases and inhibitors [BR:
carb01002
]
Aspartic peptidases
Family A22: presenilin family
140009647
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Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
140009647
NCBI-ProteinID:
XP_071911852
UniProt:
A0ABM4UX43
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Position
6e:complement(42216203..42217863)
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AA seq
433 aa
AA seq
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MSPVSICMFLVVLLVYSLTNTSASSAVRTAANLVYLESPTDTPAEKLEGALLNALVFVIL
IAFVTFVLVLLYYYRCTSFLKHYTRFSAFFVLSFMGGPIFLTIIQHFNIPVDSVTCFILL
FNFSILGVLSVFSNGVPILIRQSYMVALGIVVAAWFTRLPEWTTWVLLVALALYDLVAVL
APGGPLKILVELASRRQEELPALVYEARPTTNANISGSRGGSTLAGLLVAGMSQNDGSDH
GVELQAVSASPRTNIGNYENEIASESGHMVINMDNDDEEEVEVVREDQEETSPLMAGNSR
ERSRSPMMYESTDNSSRRLNEVAVAEMMRPRRERDGDEMIEVMNGRGIKLGLGDFVFYSV
LVGRAAMYDLMTVYACYLAIISGLGCTLILLAVCRHALPALPISIALGVIFYFLTRLLME
PFVVGTSSNLMMF
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagtgtcaatctgcatgttcttagtagttctgctagtctactccctcaccaac
acctccgcctcctccgccgtccgtacggccgccaatctcgtctacctcgagtcccccacc
gatacccctgctgagaaactcgaaggtgcactcttgaacgctctcgtttttgtgatcctc
attgcctttgtcactttcgtcttagtccttctctactactaccgttgcacaagttttctc
aagcactatactcgcttctccgccttctttgtcctctcctttatgggtgggcctatattt
ctcactatcattcaacatttcaacatcccagtcgattcagtaacttgctttatactactt
ttcaatttctcaattcttggggttttgtcggttttttcaaatggggtcccgatcttaatt
aggcagtcttacatggttgctttgggaattgttgtggctgcttggtttacgagattgccc
gagtggactacttgggttttactggtggcactggcattgtatgacttggttgcagttttg
gcgcccggtgggcctttgaaaattttggttgaattggcgtctagacggcaggaggagctc
ccagctttggtttatgaggctaggcctacaactaatgctaacatttcggggtctcgagga
ggatctactttggctggccttcttgttgctgggatgtcgcagaatgatggtagtgatcat
ggagttgagcttcaggctgtgtcagcatcaccaagaacgaatattgggaattatgagaat
gagattgcgagtgagagtgggcatatggttataaatatggacaatgatgatgaggaggag
gttgaagttgtgagagaagatcaagaggagacttcgcccttgatggctggtaattcaagg
gaaaggtcgagatctccaatgatgtatgagagtactgataacagtagtaggcgattgaat
gaagtagcagttgcagaaatgatgagaccgcgtagggaaagagatggtgatgagatgatt
gaggtaatgaatggtaggggaattaagcttgggttaggggactttgtgttctacagtgta
ttggtaggaagggcagccatgtatgatctgatgacagtttatgcttgttatctcgctatt
atatcaggacttggctgcacattgatattgttggctgtttgtcgtcatgctttgccagcg
cttccaatttcgattgctttgggggtcatattttactttttgacgcggttgttaatggag
ccctttgtagttgggacttcatcaaatctgatgatgttctga
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