Coffea arabica (coffee): 140010119
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Entry
140010119 CDS
T11342
Name
(RefSeq) structural maintenance of chromosomes protein 3-like
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carb03036
]
140010119
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
carb00535
]
140010119
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
140010119
Meiosis-specific proteins
Cohesin complex and associated proteins
140010119
Proteoglycans [BR:
carb00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
140010119
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
140010119
NCBI-ProteinID:
XP_071912571
UniProt:
A0ABM4UZ55
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Position
1e:complement(42626436..42642122)
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AA seq
1204 aa
AA seq
DB search
MYIKQVVIEGFKSYREQIATEPFSPKVNCVVGANGSGKSNFFHAIRFVISDLFHNLRSEE
RQALLHEGAGHQVVSAFVEIVFDNSDNRFPVDKEEVRLRRTIGLKKDEYFLDAKHITKTE
VMNLLESAGFSRSNPYYVVQQGKIASLTLMKDAERLDLLKEIGGTRVYEERRRESLKIMQ
ETGNKRRQIIQVVQYLDERLRELDEEKEELKKYQQLDKQRKSLEYTIFDKELHDARQKLM
EIEDARNRGSEASTKLHNSLSDAHEKAKELDRLYKDLTKEVQILSKEKEAIDKQRTEAIQ
KRAKLELDDNDLQERISTNIKAKEDAAKQLEILEKEIQESTNELNKMKPLYEGQVKEEEE
ITRGIMEREKQLSILYQKQGRATQFASKAARDKWLQKEIDEYERVLASNLTQERKLNDEI
NQLRKDLEEQDAYVLGRKNEAAALENLVSGYREVCSRYKVERDKLHAERKSLWEKESELS
SEIERLQSEVMKAEKSLDHATPGDIRRGLNSIRGIIREHKISGVLGPIVELVECDEKFFT
AVEVTAGNSLFHVVVENDDISTQIIRHLNARKGGRVTFIPLNRVKAPHITYPQSSDVVPL
LNKLKFSRDHAPAFAQVFARTVICRDLDVATRVARTDGLDCITLEGDQVSKKGGMTGGYY
DYRRSKLKFMNTIRQNAFSITLKQEELEGLKFKLQEIDQKINELVSEQQKNDAKVAHDKS
ELEQLRQDIGIVDKQKQSILKSLEKKEKLLSNILTQIDQLRGSIAVKQDEMGTELVDHLT
PEEKDSLSRLNPEITSLKEKLIACRSNRIETETRKAELEMNLSTNLVRRKQELEAVKLSA
EADMLHNEAEMKRQDLVEASILVENLTQQQKRVSQSINERNKKIKDIKDEKDSIKALEDK
YQSTLQDEAKELEQLLSKRNTYIAKQEEYSKKIRELGPLSSDAFERYKRKNIKELYKMLH
SCNEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIKELITSLDMRKDESIE
RTFKGVAKHFREVFSELVQGGRGFLIMMKKKDGDEDDNDNDEDGPRAADMEGRVEKYTGV
KVKVSFTGIGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMVRRMADMASTQFITTTFRPELVKVADKIYGVTHKNRVSRVNVVTKDEALDFIEHDQS
HNAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtatataaagcaggttgtaatcgaagggtttaagagttaccgtgagcaaattgctact
gagcccttcagtccgaaagttaactgcgttgttggtgctaatggctctggcaagtctaat
tttttccacgccattcgatttgtcataagcgatttgttccataacttgcggtcagaagaa
aggcaagctttgcttcatgaaggagctggacaccaggtggtatctgcttttgtggagatt
gtgtttgacaactctgacaatcgttttccggtagataaagaggaggttcggttgaggaga
acaattggccttaagaaagatgaatacttcttggatgcaaaacatatcacaaagacagaa
gtaatgaatttgctggaaagtgctggattctctcgatctaatccttactatgtcgtgcag
caggggaaaattgcgtcattgacgttaatgaaagatgcagaacgacttgatctgctgaag
gaaattggtgggacacgggtatatgaagagagacgtcgtgaaagtttgaaaatcatgcaa
gaaactggtaataagagaaggcaaattattcaagttgtccaatacttggacgaaagattg
agagaactagatgaagagaaagaggaattgaaaaaatatcagcaactggacaagcaacgt
aaatctctggagtacactatattcgacaaagaacttcatgatgcccggcagaagctgatg
gagatagaagatgctcgtaaccggggttctgaagcatcaactaagttgcataacagtttg
tccgatgcccatgagaaggccaaggagttagacagactgtataaagatttaacaaaggaa
gttcagatcttaagtaaagagaaagaagcaatagacaaacaacgcacagaagccatccaa
aagcgtgcaaaactcgagcttgatgacaatgatcttcaagagagaatatctactaatata
aaggcaaaggaggatgcagctaagcagcttgaaattctggagaaagaaattcaggaatct
actaatgagctgaacaagatgaagcctctgtacgaaggccaagtcaaagaggaggaggaa
ataaccagaggaattatggaacgtgaaaagcagcttagcattctttaccaaaaacaaggc
cgtgcgacccagtttgctagcaaagctgctcgtgacaagtggcttcagaaggaaattgat
gagtatgagagagttcttgcttcaaacttaacacaggagagaaaactgaatgatgaaatc
aatcaacttagaaaagatttggaggaacaggatgcctatgtacttggtcgaaaaaatgaa
gcagctgcattagaaaatcttgtgtctggatatcgagaagtttgcagccgatacaaagtg
gagagggataagttgcatgcagagcggaagtctttgtgggaaaaagaaagtgaactttct
tctgagatagaaaggcttcaatctgaagttatgaaggcagaaaaaagcctagatcatgca
acccctggtgatataagaaggggtctgaattctattcggggaataatcagggaacataaa
atatctggggtacttgggcccattgttgagctggttgaatgtgatgaaaagttcttcaca
gctgtcgaagttacagctggaaacagtttatttcacgtggtggttgaaaatgacgatata
tcaacccagatcattagacatcttaatgcacggaaaggtggacgggttacatttatacct
ttaaacagggtgaaagctccccatattacttaccctcagagctctgatgttgtacctctc
ctgaataaactgaaattctctagggatcatgccccggcatttgctcaggtgtttgcaagg
accgtaatttgccgagatctggacgtcgccacaagggttgcccgcactgatggcctggac
tgtattactctggaaggtgatcaagttagcaaaaaaggcggcatgactggtggatattat
gactatagacgctcgaaactgaagttcatgaataccatcagacagaatgcattctctatt
acactgaagcaggaagaactggaaggcttaaaatttaaacttcaagagattgaccagaaa
attaatgaacttgtttctgagcagcagaaaaatgatgccaaggttgctcatgataaatct
gaattagaacagttgaggcaggatattggtattgttgataaacagaaacaatccattttg
aaatctctcgagaagaaggagaagctactttcaaatattttgactcaaatagatcaactt
aggggcagtattgctgtgaagcaagatgagatgggaactgaacttgttgatcacttgaca
ccagaggagaaagattccctgtctaggctgaaccctgaaataacaagtctgaaggaaaag
cttattgcctgtagatccaatcgcatagagacggaaactagaaaagctgagcttgagatg
aatctctctacaaacctggtgaggcggaaacaagagttggaggctgtaaaattgtctgcc
gaggcagatatgttgcataatgaggctgaaatgaagaggcaggatctagtggaggccagt
atactagttgaaaatttaacacaacagcaaaaaagagtttctcaaagtatcaatgaacga
aacaagaaaatcaaggacattaaagatgaaaaagatagcataaaggctctcgaagataaa
tatcagagcacccttcaagatgaagctaaagaactagaacaactattaagtaaaagaaat
acttatattgccaaacaagaagaatactcgaagaaaatccgtgaattgggtcctttgtct
tcagatgcttttgagaggtataaaaggaagaacataaaagaattgtataagatgcttcac
agttgtaatgagcaactgcaacagttcagccatgtgaacaaaaaagcacttgaccaatat
gtaaatttcacagagcaacgagaagagctccaaaagcggcaagctgaattggatgctggg
gatgagaaaattaaagaacttataacctctctggacatgagaaaggatgaatcaattgag
cggacctttaaaggtgtggcaaaacatttccgagaagtgttttctgaactggtccaagga
ggccgtggatttttgatcatgatgaagaagaaggatggagatgaagatgataacgacaat
gatgaggatggccctcgtgcagctgatatggagggaagagttgagaaatatacaggcgtt
aaagtcaaggtttccttcactgggattggggagacgcagtcgatgaaacagttatccggg
ggtcaaaaaactgtggttgcactagcacttatatttgctatacaacgatgcgatcctgcc
ccgttttatctctttgatgagatagatgctgcactggatcctcagtacagaacagctgtt
ggaaatatggtaaggcgtatggcagacatggcaagtacgcagttcattaccacaacgttc
cgtccagagctagtgaaagttgctgacaaaatatatggtgtgacacacaaaaatagagtt
agtcgtgttaatgttgtgaccaaggatgaagctttagattttattgagcatgatcaatct
cataatgctgagtga
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