Coffea arabica (coffee): 140010196
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Entry
140010196 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140010196
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
carb03009
]
140010196
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-60S particles
GTPases
140010196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140010196
NCBI-ProteinID:
XP_071912810
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Position
1e:complement(43069577..43073458)
Genome browser
AA seq
1024 aa
AA seq
DB search
MGDFDRTKIRNICILAHVDHGKTTLADHLIASYGGGVLHPKQAGRLRYMDYLDEEQRRAI
TMKSSSIALQYEDHSINLIDSPGHMDFCSEVSTAARLSDGALVLVDAVEGVHIQTHAVLR
QAWIEKLTPCLVLNKIDRLISELRLSPMEAYTRLQRIVHEVNGIVSAYKSEKYLSDVDSL
LSVPSGDVGDDNFEFVEDDEEDTFQPQKGNVAFVCALDGWGFSILDFAEFYASKLGASSA
ALQKALWGPRYFNAKTKMIVGKKGMSSGSKARPMFVQFVLEPLWQVYQAALEEDGDRGVL
EKVIKSFNLLIPPRELQNKDPKAVLQSVMSRWLPLSDRILAMVVKHMPDPITAQSFRISR
LLPKRETLDNAGSSEVLAEAEVVRKSVEACNSSPTAPCVAFVSKMFAVPLKMLPRGEDLS
NYADDASGESEECFLAFARVFSGVLHAGQRIFVLSALYDPLKGESMQKHVQEAELQSIYL
MMGQGLRPVASAKAGNIIAIRGLGQNILKSATLSSTKNCWPFSSMVFQVAPTLKVAIEPS
DPADMGALMKGLRLLNRADPFVEVAVSARGEHVLAAAGEVHLERCIKDLKERFAKVSLEV
SPPLVSYKETIEGELSNPLDNLKQLSGSSEVIEKTTPNGRCVVRVKVMKLPTMLTKLLDE
SSELIGDIIGGKSGQDCKSLETSRGSIVEDENPIEALKKRIIDAVESDYTNGDSEADKER
SEKCRTRWQKLFNRIWALGPRQVGPNLLLTPDTKGKFDDSPVLIRGHPYVSVRLGFLDGS
DLSGKSADTSGVTDQTLWREAESLESSVVSGFQFATASGPLCEEPMWGLAFVVEVYISPL
AAQPIEADASAPQSEQYGIFAGQVMTAVKDACRAALLQRKPRLVEAMYFCELNTPTEHLG
SMYAVLSRRRARVVKEEMQEGSPLFTVHAYVPVAESFGFADELRRWTSGAASALLVLSHW
ETLPEDPFFVPKTEEEREEFGDGSSMPHNTARKLIDAVRRRKGLPVEEKVVQHATKQRTL
ARKV
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atgggtgattttgaccgtacgaaaatacgaaacatatgcattcttgcccatgtggatcat
gggaagaccacactggctgaccacctaattgcctcttatggaggtggggtgctccaccct
aagcaggcgggtaggcttagatatatggattatttagatgaggaacagaggcgcgctata
acaatgaagagctcttctatagctcttcagtatgaggaccattcgataaatcttatagat
tccccgggtcacatggatttttgtagtgaggtatctactgctgctaggttgagtgatggg
gctttggtgttagtggatgctgttgagggggttcatattcagactcatgctgtcttgcgt
caagcttggattgagaagcttacgccgtgtttggttttgaataagattgataggttgatt
tctgaattgagattgagtcctatggaagcgtatactcggctgcagaggattgtacatgag
gttaatgggattgtgagtgcatataagtctgaaaagtatttgtcagatgttgattcactt
ctttcggtaccttctggggatgttggtgatgataactttgagttcgtagaagacgatgaa
gaggacacttttcaacctcagaagggaaatgttgcatttgtttgtgcattagatgggtgg
gggtttagcattctggattttgctgagttctatgcttccaaacttggggccagctccgct
gcactgcagaaagcattgtggggtcctcggtatttcaatgcaaagacaaagatgattgtt
gggaaaaagggtatgagttctggatctaaggcaaggcccatgtttgttcagtttgttttg
gagccactttggcaagtatatcaggctgctttagaagaggatggtgatagaggagttctt
gagaaagttatcaagtccttcaatttgttgatacctccacgtgaacttcagaacaaggat
ccaaaggctgttcttcagtctgtgatgagccgttggctcccattgtcggacaggatattg
gcaatggtggttaagcatatgcctgaccctattactgctcagtctttccggatatctcgc
ttgcttcctaagagggagaccttggacaatgctggcagctctgaggtgcttgctgaagca
gaggttgtgaggaaatccgtggaggcttgcaattctagccctactgcgccttgtgttgct
tttgtttccaagatgtttgcagtgccattaaaaatgcttcctcgaggagaggatctgagt
aattatgcagatgacgctagtggtgaatcagaagaatgcttccttgcatttgcgagggtc
tttagtggagttctacatgcaggacagaggatttttgtgctttcagctttgtatgatcca
ttaaagggggaatcaatgcagaagcatgtgcaggaagctgagctgcagtctatttatctg
atgatgggtcaggggttgagacctgttgcctctgcaaaggcagggaatatcattgccatt
agaggtcttggccagaatatactgaaaagtgcaactctgtcatccacaaagaactgttgg
cctttctcaagcatggtttttcaagttgcacccactttgaaagttgcaattgagccttct
gatcctgctgatatgggcgcactgatgaaaggtctaaggcttttgaatcgtgcagaccca
tttgttgaggtggcagtatctgctagaggtgaacacgtgctagctgctgcaggtgaggtt
catctcgaaagatgcattaaagatttgaaggagagatttgcaaaagtaagcttggaagtc
tctccccctcttgtatcatacaaagagacaattgaaggcgagttaagcaatccattagat
aatctgaagcaattgagtggcagctctgaagttattgagaaaactaccccaaatggaagg
tgtgtagttcgagtgaaggtgatgaaacttccaactatgttaacgaagctgcttgatgag
agttctgagcttattggggatattataggaggtaaatctggtcaagattgcaaaagcttg
gaaacatcgagaggtagcattgtggaagatgaaaatccaattgaagcactgaagaaacgc
attattgatgctgttgaaagtgattatactaatggagattcagaggccgacaaagaacga
tctgagaaatgcagaacacggtggcaaaaactctttaataggatctgggctttggggcct
agacaggtgggtcctaatcttctgttgactccagatacaaagggaaagtttgacgattct
cctgttttaattaggggacacccttatgtctctgttagattgggattcctcgatggctct
gatttgagtggtaaatcagctgatacatcaggagtaacagatcaaactttatggcgagaa
gcagagagtctcgagagcagtgttgtgtctggattccaatttgctacagcatctggccca
ttgtgtgaagaacctatgtggggtttggcatttgtagttgaggtttatatatctccactg
gctgcgcaaccaattgaggcagatgcttctgctccacagtcagagcagtatggcatcttt
gctggacaggttatgacagctgttaaggatgcttgcagggcggctttacttcaaagaaaa
cctaggcttgtggaagcaatgtatttttgtgagttaaacacaccaaccgagcatttgggt
tccatgtatgcagtgctttctaggaggcgcgcccgagttgtcaaggaagaaatgcaggaa
gggtcacctctatttactgtacatgcatatgttcctgttgctgaaagttttggatttgcc
gatgagctgaggagatggacttctggtgctgcaagtgctctacttgtccttagtcactgg
gaaacacttccagaggatcctttctttgtacccaagacagaagaagagagagaagagttt
ggagatggttcgagcatgccacacaatacagcaaggaaactcattgatgctgtgagacgc
aggaagggtcttcctgtggaagaaaaagtggttcagcatgcaacaaagcagagaacattg
gctcgtaaggtatag
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