Coffea arabica (coffee): 140010427
Help
Entry
140010427 CDS
T11342
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein Q-like isoform X1
KO
K13161
heterogeneous nuclear ribonucleoprotein R
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
140010427
Spliceosome [BR:
carb03041
]
Complex C
Other components
hnRNP proteins
140010427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_10
RRM_7
PHM7_cyt
RRM_5
RBD_DEAH11
BRAP2
RRM_YTH1
RRM_SRRT
RRM_RdRP1_2
RRM_MUD2_C
RRM_PARP14_3
Motif
Other DBs
NCBI-GeneID:
140010427
NCBI-ProteinID:
XP_071913512
UniProt:
A0ABM4V1V7
LinkDB
All DBs
Position
1e:44506194..44513172
Genome browser
AA seq
489 aa
AA seq
DB search
MPKVKANALEQAEKLGEPEKSNDSDERLAFDGDNDNEDLMDEEVEYEEVEEEEEVEEIED
DEEEEVEEVEVDEEEEIEAANGSISGVSGVNEQDDNKKHAELLALPPHGSEVYIGGISRD
ASEEELRGFCESIGEVTEVRIMKGKDSSENKGYAFVTFKSVELATKAIRDLNNTEFKGKK
VKCSTSQAKHRLFIGNVPRNWGDEDLKKAVMEVGPGVTSVELVKDIKNSQNNRGFAFIEY
HNHACAEYSRQKMINPNFKLDNNAPTVSWADPKHAESSAASQQVKAVYVKNLPKDITQDQ
LKKLFEHHGKITKIVLPPAKAGQEKNRIGFVHFAERSSTMKALQNTEKYEINGQVVECSL
AKPQAEQKPTGGPNVQKSALLPSYAPPVSFGLVGGAYGAVGAGFGTTGFAQPFIYGRGPS
PAGMAMMPMLLPDGRIGYVLQQPGAQPYTPPQQKADSRISSGSGNKSGSNSGRGRQSNNS
SQGRRYRPY
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggtgaaagcaaatgcattggaacaagctgagaagcttggtgaacctgagaaa
tcaaatgattctgacgagagattagcctttgatggtgataatgacaatgaagacctaatg
gatgaagaagttgagtatgaagaagtggaagaagaagaggaagtggaagagatagaagat
gatgaagaggaagaggttgaagaagtagaggtggacgaagaggaggaaattgaagctgct
aatgggtccatcagtggtgtctcaggagttaatgaacaagatgacaataaaaagcatgct
gagctacttgctcttcctcctcatggttcagaagtatatattggcggaatttctcgagat
gcttctgaagaggaattaaggggattttgcgaatcaataggagaagtcacagaggtaaga
ataatgaaagggaaagattccagtgagaacaagggctatgcttttgtcacctttaaaagt
gttgagcttgcaaccaaagcaattcgggatcttaataacactgaattcaagggcaaaaaa
gtcaaatgttctacatctcaagcaaagcatcgtttatttattggtaatgttccaaggaac
tggggtgatgaagatttaaagaaggctgtgatggaggtgggacctggtgttacttctgtg
gaactggttaaggacataaaaaattcacaaaacaataggggatttgcatttatagaatat
cacaatcatgcatgtgctgaatattcaaggcaaaagatgatcaacccaaattttaagctg
gataataatgctccaactgtcagttgggctgatcctaaacatgccgagtcttcagctgct
tcacagcaggtgaaggcagtttatgtgaaaaacttgcctaaagatatcacccaagatcag
ttaaagaagctattcgaacaccatgggaaaatcacaaaaattgtgctgccaccagcaaag
gctggacaggaaaagaacagaatcggttttgtgcactttgcagagagatcaagcaccatg
aaagcacttcaaaacactgagaaatatgagattaatggacaagtggtcgagtgctctctt
gcaaaaccacaggcagaacaaaaacctactggaggaccaaatgtacagaagtctgctttg
ctgcctagttatgcaccccctgttagttttggtttggttggtggtgcatatggtgcagta
ggggcaggatttggtacgactggctttgctcagcctttcatctatggcaggggaccatca
ccagctggcatggccatgatgccaatgcttcttcctgatggacggataggatatgtcctg
caacagccaggagctcagccatacacacccccacagcagaaagctgacagcaggattagc
agtggtagtggcaacaaaagtggcagcaattcaggcaggggtaggcagagtaacaatagt
agccaggggcgtagatatcggccttactag
DBGET
integrated database retrieval system
