Coffea arabica (coffee): 140010445
Help
Entry
140010445 CDS
T11342
Name
(RefSeq) agamous-like MADS-box protein TM6 isoform X1
KO
K09264
MADS-box transcription factor, plant
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
140010445
Transcription factors [BR:
carb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
140010445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
Cor1
PsV_CP
Motif
Other DBs
NCBI-GeneID:
140010445
NCBI-ProteinID:
XP_071913580
UniProt:
A0ABM4V225
LinkDB
All DBs
Position
7c:7187253..7189954
Genome browser
AA seq
249 aa
AA seq
DB search
MGRGKIEIRKIENSTNRQVTYSKRRNGIFKKAHELSVLCDAKVSLIMLSDTKKFHEYTSP
SITTKKVMDDYQSAVGVDLWSTHYEKMQENLRRLKETNNKLRRDIRQRMGEDLNDLNWDN
MCRLQEKIVDSLAIIRHRKYHVIKNQTDTYKKKVRNLKERHGNLLYELLLFWDSQFHDQK
KKKRKETKESWSDCRVKEARSCEDPKYGIVDNARDYNSALALADGGLSNLYALRLQYSSH
PNLQDLRLA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtggaaagatagagatcaggaagattgagaactcaaccaacaggcaagttact
tactctaagagaagaaatggtattttcaagaaagcccatgagctcagcgttctttgtgat
gctaaggtttcactcatcatgctctccgataccaagaagttccatgagtatactagtcct
tcaataacgactaaaaaggtcatggatgattatcaaagcgctgtaggtgttgatctctgg
agcacgcactatgagaaaatgcaagagaatttaagaagattgaaggagaccaacaataag
ctgaggagagacatcaggcaaagaatgggtgaagacttgaatgatctcaactgggacaac
atgtgccgtctgcaagagaagattgttgattctcttgctatcatacgccatagaaagtac
catgtgatcaaaaatcaaactgatacctacaagaagaaggtgagaaacctgaaggaaaga
catggaaatcttctgtatgaattgcttctcttttgggattcccaatttcatgatcaaaaa
aaaaaaaaaagaaaagaaactaaagaaagttggtctgactgtcgagtgaaggaggcaaga
tcatgtgaagatccaaagtatgggattgtggacaacgccagagactacaactcggccctt
gcattagctgatggagggttgtccaacctctatgctctccgattgcagtactcgagccac
cccaatcttcaggacctccgacttgcttaa
DBGET
integrated database retrieval system
