Coffea arabica (coffee): 140013720
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Entry
140013720 CDS
T11342
Name
(RefSeq) RHOMBOID-like protein 2
KO
K27605
rhomboid-like protein, plant [EC:
3.4.21.105
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
carb01002
]
140013720
Enzymes [BR:
carb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
140013720
Peptidases and inhibitors [BR:
carb01002
]
Serine peptidases
Family S54: Rhomboid family
140013720
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rhomboid
DER1
EMC6_arch
GP41
Motif
Other DBs
NCBI-GeneID:
140013720
NCBI-ProteinID:
XP_071919817
UniProt:
A0ABM4VJW3
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All DBs
Position
8c:complement(43969365..43974008)
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AA seq
326 aa
AA seq
DB search
MMRNGDLESRGAAKGRTHNNVSSYQPYYVETSESQWTSWLVPMIVVANVAMFIVIMIINN
CPKNNYGIRGQCVAKFLGRLSFQPLNENPLFGPSSNTLEKLGALEWSKVAHQRQAWRLIT
CIWLHAGVIHLIANMLSLVFIGIRLEQQFGFVRVGAIYLLSGIGGSILSCLFIQRSISVG
ASGALFGLLGAMLSELLTNWTIYSNKVAALFTLVVIILINLALGILPHVDNFAHIGGFIS
GFLLGFVLLFRPQFGYLESRQLPPGARLKSKYAVYQYVLVLVALILLIIGFTVGLVMLFR
GENGNDHCSWCHYLSCVPTSKWSCNN
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgatgcggaacggagatctggagagtagaggagcagcaaagggcagaacccacaataac
gttagcagctatcaaccttattatgtggagacatcagagagccagtggacttcatggctg
gttccaatgatagtggtggctaatgttgctatgttcattgtcatcatgattatcaacaat
tgtcccaagaataattatgggattagagggcaatgtgtggcaaagtttcttggaaggctt
tcttttcagcctctaaacgaaaatcctctctttggcccttcttctaatacactggaaaaa
ttgggtgcactggagtggagcaaggtagcacatcagcgtcaggcatggagacttatcact
tgtatctggctgcatgcaggagtgattcatttaattgccaacatgttaagcttggtgttt
attggaattcggcttgagcaacaatttggatttgtgcgagttggggccatctacctcctc
tcaggaattggtgggagcatactctcatgccttttcattcagcgcagtatctctgtagga
gcttctggtgctctttttggtcttcttggtgcaatgctatcagagttgcttactaactgg
accatttatagcaataaggttgcagctctttttacccttgtggtcatcatcctcatcaac
ttggctcttggtatacttcctcatgttgacaattttgctcatattggaggtttcatttcg
gggtttctccttggatttgtactattgtttcggccccagtttggttacctggaaagccgc
caacttccacccggtgctcgtctcaagtccaaatatgcagtttaccagtatgttctcgtg
ctggttgccctgattttactgatcattggattcacagtaggattggtcatgctcttcagg
ggagaaaatgggaatgatcattgcagctggtgccattacctgagctgtgtgcccacatcg
aaatggagctgtaacaattaa
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