Coffea arabica (coffee): 140014309
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Entry
140014309 CDS
T11342
Name
(RefSeq) heterodimeric geranylgeranyl pyrophosphate synthase small subunit, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00900
Terpenoid backbone biosynthesis
carb01100
Metabolic pathways
carb01110
Biosynthesis of secondary metabolites
Module
carb_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
140014309
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
carb01006
]
140014309
Enzymes [BR:
carb01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
140014309
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
140014309
2.5.1.29 geranylgeranyl diphosphate synthase
140014309
Prenyltransferases [BR:
carb01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
140014309
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
140014309
NCBI-ProteinID:
XP_071921036
UniProt:
A0ABM4VND1
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Position
9c:complement(43730028..43732466)
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AA seq
347 aa
AA seq
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MLSAGIYSSSHMLMYQNHQLLPKPKAGRPIFPRTISAIRCSAVASSSSTVATQFDLKTYW
TGLIEEINQKLDEAIPVKYPHQIYEAMRYSVLAKGAKRAPPVMCVATCELFGGNRLAAFP
TACALEMVHAASLIHDDLPCMDDDPSRRGQPSNHTVFGVDMAILAGDALFPLGFRHIVSH
TPTDLVPETRLLQVIAEIARSVGSTGMAAGQFLDLEGEPNAVDFVQEKKYGEMAESSAVC
GGLLGGASDEELQLLREFGRAVGVLYQVRSDVLKAKIETRDKDEDKRRSKSYVGVYGVEK
AMEVAEHLKAEAKKALEGLEKYGEKLLPLYSFVDYADDRGFSLDAGI
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgctttccgctggaatctattcttcttcgcatatgttgatgtaccagaaccaccagctc
ctcccaaaaccaaaagccggtcgtcccattttcccaagaaccatatcagcaattcggtgc
tctgccgtcgcctcatcatcatcaacggtggcgacccaattcgaccttaaaacttattgg
actggtctcatcgaagaaatcaaccagaagctggatgaggccattccggtcaaatatccc
catcagatttatgaggccatgcgttactccgttcttgccaagggtgccaagagggcccca
cctgtcatgtgcgtcgccacctgcgagctcttcggcggtaaccgtctcgccgccttcccc
accgcctgtgctcttgaaatggtccatgctgcttccttgattcatgatgatttgccctgc
atggatgatgatccatcccggcgaggtcagccctcaaaccacactgtattcggcgttgac
atggcaattttagctggtgatgctttattccctcttggcttccgccacatagtctcccat
acgccgactgatctcgttcctgagactcgcctcctccaggttatcgcggagattgcaaga
tccgtgggatcaactgggatggctgccggtcagttccttgacttggaaggggaacccaat
gcagttgattttgtgcaagaaaagaaatatggtgaaatggccgagtcctctgccgtttgc
ggtggcctgttgggcggcgcttcggatgaggaactccaactgctgagagagtttggtcga
gctgttggcgtgctatatcaggtcagaagcgatgtgttgaaggcgaaaatagaaactcga
gacaaagacgaggacaagaggaggagtaagagttatgtaggagtatacggcgtggagaag
gctatggaagtggctgagcatctcaaagccgaggccaagaaagcattagagggcttagag
aaatatggtgagaaattgcttccgctctacagctttgtggattatgcggacgatagaggt
tttagtcttgatgcggggatttag
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