Coffea arabica (coffee): 140014806
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Entry
140014806 CDS
T11342
Name
(RefSeq) uncharacterized protein isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
carb03041
]
140014806
Spliceosome [BR:
carb03041
]
Common components
Common spliceosomal components
General mRNP proteins
140014806
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
Motif
Other DBs
NCBI-GeneID:
140014806
NCBI-ProteinID:
XP_071922388
UniProt:
A0ABM4VS76
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Position
9e:complement(40565505..40574024)
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AA seq
605 aa
AA seq
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MEFDEFDDYSEKTADNPETSNGSDQVDKSGGGQDPIKRPMHKSDHHHQRVKRSRTREEFH
EDEEERSSSYRHHSPSRDRERSGRERYRSSRESKDRDKHKSSKKERDGDKIKESDRERDT
NKGEDSGRRGRGREDERQRGRERNQDLSNRTSHSERHLVDGEREESRDREKNGDREYGGR
ERQSQLQDGDRESRRFKEKKEEVAEPEADPEHDQRTVFAYQISLQADERDVYEFFSRAGK
VRDVRLIVDHISRRSKGIGYIEFYDVMSVPMAIALSGQPLLGQSVMVKPSEAEKNLVQST
ASVAAGDTDLICPYSGGARRLYVDNLHSNIKEDQLRQVFEPFGTVELVQLPPDLETGHSS
RYGFVQFSRLEDARAALSLDGQLDIAGRVMKVSAVTDQTLRQEVGANAGDFGDDEGGGLS
LSAESLTLLMQKKLDHTRITSSGAGSVGRPVVDNPGFSAPAAPVLGAAPEVSPFVPFGQI
PVPALAGWPAAGLSLPSVTFPSIDTIGIPSECLLLKNMFDPKLESEPEFDQDIKDDVEDE
CSKFGKLKHIYVDKKSDGLVYLRFENNQAAIAAQRALHGRWFAGKMILATFMVPQNYEVT
FPQSK
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgacgagtttgatgattactcggagaaaacagcggataatcctgagacgagc
aatggcagtgatcaagtggataaatctggtggaggccaagacccaattaagaggccaatg
cataaaagtgatcatcatcatcaacgggttaagcgttcaaggacgcgggaagagttccat
gaagatgaggaggagaggagctcaagctaccgtcaccattccccttcaagagatagagag
aggagtgggagggagagatacaggagtagccgagaatccaaggacagggacaagcataag
agcagcaagaaggagagagatggggacaaaatcaaagaaagcgacagagaaagagatacc
aacaaaggcgaagatagcggaaggagaggtcgtggccgcgaagatgaaagacagagaggt
agggagagaaatcaagacctgtcgaatcgtacaagtcattcagaaaggcatctggttgat
ggagagagagaggagagccgagacagggagaagaatggtgatagggagtatggaggaagg
gaaagacagagccagttacaagacggggaccgagaaagcaggagatttaaagaaaaaaag
gaagaagtggccgagccagaggctgatcctgagcatgatcaacggacagtttttgcttat
cagatttctttgcaggcagatgaaagagatgtctatgagttttttagcagagctggcaag
gtcagagatgtacgcctcatagtggaccacatttctagacgctccaaaggcattggatat
attgaattttacgatgtcatgtcggtccctatggcgatagccctgtccggccaacctctt
cttggtcaatcagtgatggttaaaccatcagaggctgaaaagaatcttgttcagtcaact
gcatctgtggctgctggagatactgacctaatatgcccgtactcaggtggagctaggagg
ttgtatgttgacaatctgcattctaacatcaaagaagatcaacttcgtcaggtttttgaa
ccatttggtactgttgagttggtgcagctgcctcctgacctggagactgggcatagcagc
cgctatggttttgtgcagttttctcgccttgaagatgctagagctgcactaagtttagat
ggacaactggatattgcaggccgagttatgaaggtatcagctgttacagatcaaacttta
agacaagaagttggtgcaaatgctggagattttggtgatgatgagggtggtggtctgtct
ctgagcgctgaatctctaacacttctcatgcagaagaagctggatcatactaggataaca
tcaagtggtgctggatctgttggcaggccggttgttgataaccctggcttttctgcacca
gcggctccagttcttggggctgcccctgaggtatctccttttgttccttttggacagatt
cctgttccagcacttgcgggatggcctgctgcaggtctctcactgccttctgttactttt
ccttcaattgatactataggcattccaagtgaatgtttattgttgaagaacatgtttgat
ccaaaattagagtctgaacctgagttcgaccaggatattaaggatgatgttgaggatgaa
tgttcaaaattcggaaagttgaagcacatttatgtggacaagaaaagtgatgggttggtg
tacctgcggtttgagaacaatcaagctgcaattgctgcgcagcgtgcacttcatggtaga
tggtttgctgggaagatgatccttgcaacgttcatggtgccgcagaattacgaggtcacg
tttccccagagcaagtag
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