Coffea arabica (coffee): 140015067
Help
Entry
140015067 CDS
T11342
Name
(RefSeq) protein NRT1/ PTR FAMILY 5.10-like isoform X1
KO
K26562
MFS transporter, POT/PTR family, peptide/nitrate/nicotianamine transporter
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
140015067
Transporters [BR:
carb02000
]
Major facilitator superfamily (MFS)
Nitrate/nitrite transporters
Proton-dependent oligopeptide transporter (POT/PTR) family [TC:
2.A.17
]
140015067
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PTR2
MFS_1
Motif
Other DBs
NCBI-GeneID:
140015067
NCBI-ProteinID:
XP_071923031
UniProt:
A0ABM4VU18
LinkDB
All DBs
Position
10e:complement(10040220..10046701)
Genome browser
AA seq
580 aa
AA seq
DB search
MASTDPIGLAIIPADIPSSDEEVSACHHDTIDGVVDYQGLPAKRSQSGKWKSAYFIIGVG
VAERFAYFGVGSNLITYLTGHLRQSTAVAAANVNLWTGAGAMLPLVGAFVADSFLGRYRT
IVVASVIYILALGLLTISAMLNCQSNISMQSCSPSQLQVILFFFSLYLIALSQGAHKPCI
VAFGADQFDGQDSEESRSKSSFFNWWYFGLCAGPLSALLVLNYIQDNLSWALGFGIPCSS
LAVALLVFLLGTKTYRYKVKDEEKFSVSNIGNLFAKGAKYRQFVPSSKSSEGVHATVNEA
RSKQYEFLNEALLEKDDLEKYKDVSEVCEFEELKSLKDLFPIWATSLAYAVVFAQTSTLF
TEQGVTMDKSIGSGFVLPAASLQYLTGISIILFAPIYDRIFVPLARTITGRPSGITKLQR
IGIGMVLCTASMIIAALVERKRLQIAQWNGLAGLPHATVPMSFWWLVPQYILFGIADVFT
VVGLQELFYDQMPSELKTIGLSFFLSIFRIGSFLSSFLISSIERFTSTGSRVGGWFSSNL
NLAHLDYFYWLLAGFSMVEFLAFLYHANSYAYNGQGRSTA
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggccagtactgatcctattggattagccatcattcctgcagatattcccagttctgat
gaagaagtttcagcttgtcatcatgatacgattgatggtgttgtagattatcaaggtctc
ccagcaaaaagatcccaatcaggaaaatggaaatctgcttatttcattataggtgttgga
gtagcagagaggtttgcatactttggagtaggttccaatcttataacttaccttacgggt
catcttaggcagtcaacagccgttgcagctgccaatgttaacttgtggacaggcgccgga
gcaatgctgccgcttgtgggggcatttgtggccgattcatttctaggccggtatcggacc
atcgtggttgcatctgtgatttacatcctggcacttggcctattaaccatatctgctatg
ctcaactgccaaagcaacatcagcatgcaatcatgttcccctagccaattacaagttatt
ctcttcttcttttctctatatttaatagcacttagccagggggcgcacaagccatgcatt
gtcgcatttggagcggaccagtttgatggacaagattcagaagagagcagaagcaaaagt
tcattcttcaattggtggtattttggtttatgtgcaggtcctttgagtgcactattggtc
ttaaactacattcaagataaccttagttgggctctcggctttgggatcccatgcagctct
cttgcagtggccctactcgtattcttacttggcactaagacttataggtataaagtgaaa
gatgaagagaagttttccgtttcaaatattggcaatttgtttgctaaaggagctaagtat
cggcagtttgtcccttcatcaaagtctagtgaaggagtacatgcaacagtcaatgaagca
agatccaagcaatatgaatttctcaatgaagctttgctggaaaaagatgatcttgagaag
tacaaggatgtgtccgaagtctgtgaatttgaagaattaaagtcacttaaagatttgttt
cctatatgggctacatccttggcatatgctgttgtgtttgcacaaacttccactttgttc
acagaacaaggagttacaatggataaatcaataggttcaggatttgtgttaccggctgct
tcacttcagtatttaacaggcatttccattatcctttttgcccctatttatgaccgcatt
tttgtccctcttgcaagaactatcaccggaaggccatcagggataacgaagctgcagaga
attggaataggaatggttctatgtactgcttcaatgatcattgctgctcttgttgaaaga
aagagacttcaaattgctcaatggaatggtttagctggtctgccacatgcaacggttcct
atgagtttttggtggttggtgcctcagtatatattgttcggaattgctgatgttttcact
gtggttggtttgcaggagcttttctatgatcaaatgccaagtgaattgaaaactataggc
ctctctttttttctgagtatctttcgaattgggagctttctaagcagttttcttatctcc
agcattgagagattcacaagcaccggcagcagagtcggaggttggttttccagtaacttg
aatctagcacatcttgattacttttactggttacttgctggatttagtatggtggagttc
ttagccttcttgtatcatgcaaattcttatgcctataatggtcaaggtcgttccactgcc
tga
DBGET
integrated database retrieval system
