Coffea arabica (coffee): 140015566
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Entry
140015566 CDS
T11342
Name
(RefSeq) dynamin-2A-like
KO
K01528
dynamin 1/3 [EC:
3.6.5.5
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04144
Endocytosis
carb05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
140015566
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
140015566
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
carb04131
]
140015566
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
carb04147
]
140015566
Enzymes [BR:
carb01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
140015566
Membrane trafficking [BR:
carb04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
140015566
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
140015566
RhoA-dependent endocytosis
140015566
Exosome [BR:
carb04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
140015566
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dynamin_N
Dynamin_M
GED
PH
MMR_HSR1
PH_8
AIG1
FtsK_SpoIIIE
SOS1_NGEF_PH
Nudix_hydro
ARGLU
Motif
Other DBs
NCBI-GeneID:
140015566
NCBI-ProteinID:
XP_071924335
UniProt:
A0ABM4VXT0
LinkDB
All DBs
Position
10c:10565933..10580935
Genome browser
AA seq
922 aa
AA seq
DB search
MDAIEELSQLSDSMKQASALLADEDVDEATSSSSKRPSTFLNVVALGNTGSGKSAVLNSL
IGHPALPTGEGGATRAPICIDLKQDGSLNSKSIILQIDSKSQPVSASALRHSLQDRLSKI
SSKSRDEIYLKLRTSTAPSLKLIDLPGVDKGNLDDSLGEYAERNDAILLVVIPAAQAPEV
ASTKAVRLAKEFDGECTRTVGVISKIDQAASDPKILAAVQALLLGQGPRTTADIPWVALI
GQSVSIASAQSGSAGVDNSLETAWRAESESLKSILTGAPQSKLGRLALVETLAHQIRSRI
RIRLPNLLQGLQGKSQVVQDELVRLGEQMVDSAEGTRALALELCREFEDKFLLHITSGEG
DGWKVVASFEGNFPNRIKQLPLDRHFDINNVKRIVLEADGYQPYLISPEKGLRSLIKIVL
EMAKEPSRLCVDEVHRVLVDIVSSSANATPGLGRYPPFKREVVAIATDALDGFKNEAKKM
VVALVDMERAFVPPQHFIRLVQRRMDRQRREEELKGRSSKKAADAEQSILNRATSPQTGG
QQAGGSLKSMKDKSGQQDKDAQEGPALKTAGAEGEITAGFLLKRSAKTNGWSRRWFVLNE
KTGKLGYTKKQEERHFRGVITLEECNLEEVDDDEAPPPPKSSKDKKANGPDAAKGPSLVF
KITSRVPYKTVLKAHSAVVLKAESTADKTEWLNKLRNVISSKGGQVKGESGPPIRQSLSD
GSLETMTRRPADPEEELRWMAQEVRGYVEAVLNSLAANVPKAVVLCQVEKAKEDMLTKLY
SSISSQSTAKIEELLQEDQNVKRRRERFQKQSSLLSKLTRQLSIHDNRAAAAASYANGSG
AESSPTTSGPSSGDEWRTAFDAAANGPTDSYGDSRYGSNGHSRRYSDSAQNGDVSSSSGS
GRRTTPNRLPPAPPSSGSGYRF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgatcgaggagttgtctcagctgtcagactcgatgaagcaagcgtcggccttg
ttagccgatgaggatgttgatgaagccacgtcgtcgtcgtctaaacggccgtccactttt
ctcaatgtcgttgctctcggcaacaccggttcaggtaaatcagctgtgttaaacagttta
attggacatccggctttgccgactggtgaaggtggtgctactcgtgctcctatatgcatt
gatttgaaacaggatggttctttgaacagcaaatcgataattttgcagattgacagcaaa
tctcaaccagtttctgcaagtgcccttcgtcattctttacaagacagactgagcaaaatt
tcaagtaaaagtcgtgatgagatatatttgaagcttcgaacaagcacagctccttcgttg
aaattgattgatttgcctggagtggataaggggaatcttgatgactcattgggtgaatat
gctgaacgtaatgatgccatcttgcttgtggtaatacctgcagcacaggcaccggaagtt
gcctcaactaaagctgtcagacttgcgaaagaatttgatggagaatgtacaagaactgtt
ggtgtcattagtaaaatagatcaagcagcttcagatccaaaaatccttgctgctgttcag
gctcttttgttgggtcaaggaccacggactacagctgatatcccctgggttgcattaatt
ggtcaatctgtgtctattgcctctgctcagtcagggagtgctggagttgacaactcattg
gaaactgcctggcgtgcggagagtgagagccttaaatctatattgactggagcccctcaa
agcaagctcggtagattagctttggtagagactttagctcaccagattcgcagtcggata
agaatcaggcttcctaatctcctccaaggacttcaaggaaagtctcaagttgtacaggat
gaattggtaaggcttggggaacagatggttgatagtgctgaaggtaccagggccttggct
ttggagctttgccgtgaatttgaggacaagtttctcctgcatattacaagtggagagggt
gatggttggaaagttgttgctagttttgagggcaactttccaaacaggataaaacaactc
cctttagatcgacattttgacataaataatgttaagaggattgttctggaggcagatggt
tatcaaccctaccttatttctccagagaaagggttgagatctttaataaagattgtttta
gagatggcaaaagaaccttcccgactttgtgtcgatgaggtgcaccgtgtacttgtcgac
attgtatcatcttccgccaatgctactccaggtcttggaagatatcctccttttaagcga
gaggttgtagcgattgccactgatgctttggatgggttcaagaatgaggctaagaagatg
gttgttgctcttgttgacatggagcgagcatttgttccccctcaacattttattcgtttg
gtgcagaggcgaatggatagacaacggcgtgaagaagagctgaaaggtcgatcttctaaa
aaagcagcggatgcagagcaatcaatattgaatagggcaactagtccccaaactggaggg
caacaagctggggggagcttaaagtcaatgaaggataaatctggtcagcaagacaaagat
gcccaagaaggaccagcgttgaagactgctggggctgagggagagataacagcagggttc
ttgttgaagagaagtgctaaaacaaatggatggagcaggcgatggtttgttttaaatgaa
aaaactggaaagcttggatataccaaaaaacaagaagagcggcattttcgtggtgtgatt
actttagaggaatgtaaccttgaagaagttgatgatgacgaagctcctcccccacccaaa
agttccaaggataagaaggctaatgggcctgatgctgcaaaaggacctagtcttgtattc
aaaataacgagcagggttccatacaaaactgttctaaaagctcacagtgctgttgtttta
aaggccgagagtacggcagataagactgagtggctgaacaagttgagaaatgttattagt
tcaaaaggtggtcaagtgaagggcgaatctggacctccgatccgccaaagtctttctgat
ggttctcttgaaaccatgacgaggagacctgctgatcctgaagaagaacttcggtggatg
gctcaagaagttcgcggttatgttgaagcagttctaaacagtcttgctgccaatgtccca
aaagcggttgttctttgccaagtagaaaaggcaaaagaagatatgcttacgaagttgtac
agttctatcagttcccaaagtacagcaaagattgaagagctgcttcaggaggatcagaat
gtaaaacgcaggagggaacgctttcaaaagcaatcttctcttctttcaaagcttaccagg
cagctcagcattcatgataatcgagctgctgctgctgcaagttatgcaaatggcagtgga
gcagaaagtagtcctaccacttctggaccttcatcaggtgatgagtggagaactgctttt
gatgctgctgccaatggtcccacggactcttatggtgactcgagatatggatccaatggc
cacagtcgtcggtacagtgactctgctcaaaatggtgatgttagctccagttccggttcc
ggccgccgcacaactcctaatcgattaccacctgcaccgccatcatctggttccggctat
agattttag
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