Coffea arabica (coffee): 140016020
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Entry
140016020 CDS
T11342
Name
(RefSeq) transcription factor E2FC-like
KO
K06620
transcription factor E2F3
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
140016020
Transcription factors [BR:
carb03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, E2F
140016020
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GFIT
Motif
Pfam:
E2F_CC-MB
WHD_E2F_TDP
TrmB
Motif
Other DBs
NCBI-GeneID:
140016020
NCBI-ProteinID:
XP_071924983
UniProt:
A0A6P6UVG8
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Position
10c:2778099..2782827
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AA seq
448 aa
AA seq
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MSTSGDGRGRGRERHIDIDLNVSLNSSFGNLSLAASGVPPPPRLEPQHRFSVPVVPSRVC
ERLDPFASIHSPPAAADPSAIINYCIAPNFLDIQPKDSFTSRNSPSLLGLPDTNEHGIFE
ANKGTSKTSSVHDITQAVNAASLKLPVSLLEAKQCSKARGSNHVKPGTLEPNAEVLDNVG
VVGSCRYDSSLGLLTKKFIKLIREAEDGCLDLNRAADLLEVQKRRIYDITNVLEGVGLIE
KTTKSHIRWKGYEMFGPEELNNQASILKAEIERLFAEDCRLDDCIRKMDEKMNALVHAGT
SQRTLYLTEEDIMSQPCFRNKTVIAVKAPHASTLEVPDPDEDIGFSERQYKLILRSTTGP
IDLYLLSNHGGHHEDVKVKRRKLLDSSVVNGCRQGADDAYYSDASGLQSSDVSGINKIIP
SDGAVNDDYWLRSDYAVTATDLWGTECS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacctctggtgatggtagaggtagaggtagagagagacacattgacattgatttg
aacgttagtttaaacagcagtttcggcaacttatccctcgcagcttctggtgttcctccc
cctcctcgtttggagccacaacatcgtttctcggttcccgtggtcccgtccagagtctgt
gaacggctcgacccttttgcctctatacattctcctcctgctgctgctgatccctctgct
attatcaattactgcatagctcccaattttctagatattcagcctaaggactccttcaca
agtcggaattcaccttcacttctcggtcttccggatacgaatgagcatggcatctttgaa
gctaataaaggcacaagtaaaactagctcggttcatgacattactcaagctgtaaatgcc
gcttcacttaagctgccagtatctctccttgaagctaagcaatgcagcaaagcaagaggc
tcaaatcacgtgaaaccaggaacgttggaaccaaatgcagaggttcttgacaatgtgggt
gtagtaggtagctgccgatatgacagctctctaggcttgttgacaaagaagttcattaaa
ttgatacgggaagctgaggatggatgccttgatctcaatagagctgcagatctgttggag
gtacagaaaaggcgaatatatgatattacaaatgtccttgaaggagtaggattaattgaa
aagactacaaagagtcacatacgttggaagggatatgagatgtttggaccggaagagttg
aataatcaagcaagcattctgaaggctgaaattgaacgtttatttgctgaagattgcagg
cttgacgattgcataaggaaaatggatgagaagatgaatgccctagtgcatgctggaact
tctcaaaggaccctttatttgactgaggaagatatcatgagccagccatgtttcaggaat
aaaactgttatcgctgtaaaagctccacatgctagtactcttgaagttcctgatcctgat
gaagatatcggattctcagaaaggcagtacaaacttattcttcgaagcactactggacct
attgatttgtatctcttgagcaatcatggaggacatcatgaagatgtgaaggtcaagcgc
agaaaattattggattcatcagttgtgaatggttgcagacaaggggcggacgacgcgtat
tattcagatgcttctggtttgcagagctctgatgtatctggcattaataaaataatccca
tcggatggggctgttaatgatgactattggttgcgatcagattacgcggtcactgctaca
gatctgtggggtacagaatgttcttag
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