Coffea arabica (coffee): 140032814
Help
Entry
140032814 CDS
T11342
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 3-like isoform X1
KO
K03255
protein TIF31
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
carb03012
]
140032814
Translation factors [BR:
carb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
140032814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140032814
NCBI-ProteinID:
XP_071929684
UniProt:
A0ABM4WD15
LinkDB
All DBs
Position
Unknown
AA seq
1740 aa
AA seq
DB search
MAPRSGRGKGNKAKTDKKKKEEKVVPGVLDITVITPYETQVILKGISTDKILDVKKLLAA
NVETCHLTNYSLSHEPKLQVKGQKLNDKLEVVTLKPCLLKMVEEDYAEVSQVLAHVRRLL
DIVACTTRFAKTRGGRAATAGGGTESRAKKNKTQQNSPSGRPSSPADGEVRPPDSPSPAP
AAAVGEGYDMVAIHPIPKLSDFYEFFNFSHLTPPILNLKRVDRKDGEMGREGDFFEMQIK
ICNGKLIQVVASRKGFYTMGKQFLQSHSLVDLLQQLSQAFVNAYDSLMKSFIEHNKFGNL
PYGFRANTWLVPPSVADPTSEFAPLPAEDENWGGNGGGQGRYGEYVLRPWATEFAILASL
PCKTEEERVVRDRKAFLLHNLFVEVSTFKAVSAIGELMDSTAKGRINSSTGSILLEDRVG
DLSITVKRDATDASSKAEVKNIFSGIPNQSSQEVTQRNLLKGLTADESVVMHDTPSLGVV
VVRHCGYTATVKVIGHVRRGRNLVNNIEIDDQPEGGANALNINSLRILLHKSFTSESSGE
GQSRNSHYCNFEKSRCIVRKIVEDSLSKLADEAMHDRTIRWELGSCWVQHLQKQETPTEN
SSKNKEDDNKVEPVVKGLGKQFKMLKKRERKPNSSSSIEENEESGGVSGSNTKSSIDELN
SNDSECGNELRNIISEEAYQRLKESGTGLHLKSVDELMKLAHKYYDEVALPKLVTDFASL
ELSPVDGRTLTDFMHLRGLRMCSLGRVVELAEKLPHIQSLCIHEMVTRAFKHVLKAVIAS
VDNWANLPVAIASSLNFLLGSCTAEDTGSNFSDDYTLHLEWLRTFLAKRFGWRLKDEILK
LRKLSILRGLCHKVGLELVPRDYDMGNPNPFRPSDIISVVPVCKHVGCSSADGRNLLESS
KIALDKGKLEDAVNYGTKALAKMIAVCGPYHRTTASAYSLLAVVLYHTGDFNQATVYQQK
ALDINERELGLDHPDTMKSYGDLSVFYYRLQHIELALKYVNRALFLLHFTCGLSHPNTAA
TYINVAMMEEGMGNVHVALRYLHEALKCNQRLLGADHIQTAASYHAIAIALSLMEAYSLS
VQHEQTTLQILQAKLGLEDLRTQDAAAWLEYFESKALEQQEAARNGTPKPDASIASKGHL
SVSDLLDYISPDPDSRVTDAQRKRRAKVLPVGDKLQQGLHDDRNDESTSGDVIDMIVTAA
GSDNVETKAIKVPIQEPEVIDSSITTSPVIEEVVQDISSDEGWQEANPKGRSGNGSGRKF
NRRRPNLTKLKLNSEWHNFGDNSQRKEAIAQGRKPSSKTMSGDISLQKQAKTASLGAIED
SSKPPAKSLDARVSPTSASKVSLNPASLTPTASKSLSYKDVAVAAPGTVPKPFLEKVEQK
VEELNEAHTDNPISISQPETSENGKESIALDDALPNPEDTGSPVEGEVNGSGSKAENSTP
EFEDVLNPNDQEKHAETNGSKLSAAAPPFNPGACPLVHSLSSPTATSVYDVVASQSMLTE
PAAFPSVAARVPCGPRSPLYYRTSHSYRMKHGILNYQIPIMERNESVSPKTMNPHAPEFV
PRKAWGQSAATEGSKGSTSSDSSGDSNASDPEVSSEEKLDKKVSNGLQEARSKKSSSEAE
KAELARQILLSFIVKSVQHSSDSQSESLVSEKKREGSANSAEAIANDSAIIKVLNGNEGK
KEMVSEGNKNEKPKIVDVNKNRHGDGEGFIVVTKRRRNRQHFTNGVNGLYNPRSICASVR
NT seq
5223 nt
NT seq
+upstream
nt +downstream
nt
atggccccaaggtcaggcaggggcaaaggaaacaaagctaagactgataagaagaagaaa
gaagagaaagttgtacctggtgttcttgacataactgtcatcaccccatatgaaacccaa
gtcatactcaagggcatctcgacggacaagatactggatgtcaagaagttgcttgctgcc
aatgttgaaacatgccaccttacaaactattctttatctcatgagcctaaactgcaggtt
aaaggacaaaaattaaacgacaagttggaggttgtcacgctcaagccatgtctgctgaag
atggtcgaagaggactacgcagaggtgtctcaagtgttagcccacgtgcggagactactt
gacatagtcgcgtgcactacacgcttcgccaagaccaggggtggaagagccgccaccgct
ggcggcggaacagaatctcgtgccaagaagaacaaaacccagcaaaatagtccatctggc
cgaccgtcctcaccggctgatggagaagtccggccaccggattctccgtcgccggcgccg
gcggcagccgtaggtgaaggctacgatatggtggctatacacccgattccgaagctctcc
gatttctacgagttcttcaatttctcccacctaactcctccaatattaaatttgaaaagg
gtggatcgtaaagatggagagatggggcgcgaaggagattttttcgaaatgcagatcaaa
atatgcaatggcaaattaatacaagtggttgcatcaagaaaaggtttctatactatggga
aagcaatttttacaaagccactccttggttgatcttctgcagcagcttagccaagccttt
gttaatgcatatgattcattaatgaaatcctttatagaacacaataagtttggcaatctt
ccatatggtttccgggccaacacttggcttgtccctccatctgtagccgatcctacatca
gaatttgcacccctgccagcagaggatgaaaattggggaggcaatggtgggggtcaggga
aggtatggagagtatgtgttgagaccatgggctacagaatttgcaatattggcaagcctt
ccttgtaaaactgaggaggagagggtggtccgcgaccggaaggcctttttgcttcacaat
ctttttgttgaggtttcaaccttcaaagcagtttcagccataggcgaactaatggattcc
actgcaaaaggtagaatcaattcttctacaggttcaatattgcttgaggatcgtgttgga
gacttgtctataacagtaaaaagagatgcaacagatgcgagctcaaaagcagaagttaaa
aatatcttctcaggaattcctaaccaatcctctcaggaagtgactcaaagaaacttactt
aaagggttgactgcagatgagagtgtagttatgcatgatactccctcattgggagttgtt
gttgtgagacattgcggatatactgcaacagttaaagttattggtcatgtcaggagggga
aggaatttagtgaataacatagaaattgatgaccaaccagaaggaggagccaatgcactc
aacattaacagcttgcgcattttgcttcacaagtcatttacttctgaatcatctggggaa
ggccaatcacgtaactcccattactgtaactttgagaaatcaaggtgcattgttcgaaaa
atagttgaagatagtttgagtaaattagcagacgaagctatgcatgataggactatcagg
tgggaacttggttcttgctgggtacagcatctacaaaaacaggaaacaccaacagaaaac
agttcaaaaaataaagaggatgataacaaggttgagccagtggttaaaggcttagggaag
caatttaaaatgctgaagaagagggaaaggaaaccaaatagttctagtagcatagaagaa
aatgaagaaagtggtggagtcagcggttccaacaccaaaagcagcattgatgagttaaat
agcaatgactctgaatgtggaaatgagttgaggaatattatttctgaagaagcttatcaa
cgtctgaaagaaagtggaaccggtcttcatctcaagtctgtcgatgagctcatgaagctg
gcccataagtattatgacgaagttgctttgcctaagctggttacggactttgcatctctt
gaactgtccccagttgatggacgcacgctcactgatttcatgcatctaagagggttgcgg
atgtgttctttgggtcgggtggttgaacttgcggagaagcttcctcatatacagtcgctt
tgtattcatgagatggttactcgagcttttaagcatgtacttaaggcagttattgcttct
gttgacaattgggccaacttaccagtagcaattgcgtcatcacttaacttcttgcttggc
tcctgcactgctgaggacactggttcaaactttagtgatgattatacactccatttagaa
tggttgaggacatttttggcaaaaagatttggttggaggctgaaagatgagattctgaag
ttgaggaagttgtcaattcttcggggactttgtcataaggtcgggttggagttggttcca
agagactatgacatgggaaacccaaatccatttagaccatctgatattatcagtgtggtg
cctgtctgtaaacatgtaggatgctcttctgctgatggaagaaatttactagagtcatcc
aagattgcactggataaagggaagcttgaagatgctgttaattatggaacaaaagctctt
gcgaagatgatagctgtatgcggtccctatcatcgaacaactgcaagtgcctacagtctc
ctggctgttgttctttatcacactggagattttaatcaggcaactgtttatcaacaaaag
gcattggatatcaatgagagggagctaggacttgaccatcccgatacaatgaaaagttat
ggggatctttctgtgttttattatcgtcttcagcacattgagttggcactcaaatatgtc
aaccgtgctttgtttcttcttcattttacctgtggactatctcatccgaatacagctgct
acgtatataaatgtggccatgatggaagagggaatgggtaatgttcatgtggctctcaga
tatctgcatgaagcccttaaatgcaaccaaagattactgggagcagatcatatacagact
gctgctagctatcatgccatagccatagctctttcattaatggaagcatattcacttagt
gtgcaacatgaacaaactacactacaaattcttcaagctaaactgggattggaggatctc
cgaactcaggatgctgctgcatggctggaatattttgaatcaaaagccctggaacagcaa
gaagcagcaaggaatggaaccccaaaacctgatgcatctatagctagcaaaggacatctt
agcgtatctgatctccttgattacataagtcctgatccagattcaagagtcacagatgca
cagaggaagcgacgtgcaaaggtgttgcctgtgggtgataaactccagcaggggctgcat
gatgatagaaatgatgagtccacaagtggtgatgttattgatatgattgtgactgcagca
ggaagtgacaatgtggaaacaaaggcaatcaaggttcccatccaggagcccgaggtcatt
gatagcagcattaccacttctccagttatagaagaagttgtccaagatatcagttcagat
gaggggtggcaagaagctaacccaaaaggacggtctggtaatgggtctggaaggaagttc
aaccgcaggcggccaaatcttacgaagttgaagctaaactctgaatggcataattttgga
gacaacagtcagcgaaaggaagctattgcacagggacgtaaaccatcatccaagactatg
tcaggtgatatttctctgcagaagcaagctaagactgctagtcttggtgctattgaagat
tcaagtaaaccaccagccaagtctttggatgctagagtttctccaacatcagcttctaaa
gtgtccttaaatcctgccagtctcacacccacggcttccaagtctttgtcatataaagat
gtagccgtggcagcaccaggtacggttccaaagccctttctggagaaagtagaacaaaag
gtagaagaattaaacgaggcacacactgataacccaatctccattagtcaacccgagaca
tcagagaatgggaaagaaagcatagctctagacgatgcattacctaatcctgaagataca
ggatcaccagttgaaggtgaggttaatggaagtggtagcaaggcagagaattcaaccccg
gagtttgaggatgtcttgaatccaaatgatcaagaaaaacatgcagaaacaaatgggagc
aagctttcagctgcagctccaccatttaatccaggtgcctgccccttggtccactcattg
agctcccctacggcaactagtgtctatgatgtagtagcaagtcaaagcatgctcacagaa
ccagcggctttcccctcagttgcggctagagttccttgtggtcctagatcacctttatac
tacagaacaagccattcgtaccgaatgaaacatgggatcttaaattaccaaatccctata
atggaaagaaatgaatctgtttcgccaaaaactatgaaccctcacgcaccggaatttgtt
cccagaaaagcttggggccagtctgcggcaactgaaggttcaaagggatctacttcttct
gattcctcgggagactccaatgcatcagatcctgaagtttcctcagaagagaagcttgat
aaaaaggtaagcaacgggctccaagaagcgaggtcaaagaagagtagttcagaagctgaa
aaggctgagttagcgagacaaatactactaagctttattgtcaagtcggtgcagcattct
tcagattctcaaagtgagtcccttgtcagtgagaagaagcgggagggttctgcaaattct
gctgaagcaattgcaaatgacagtgcaataataaaagtcctaaacggaaatgaaggaaag
aaagaaatggtgtccgaaggcaacaagaatgaaaagccaaaaatagtcgatgtgaataag
aataggcatggggatggcgaaggatttattgttgttacaaaacggagaagaaataggcag
cacttcacgaatggggtgaatgggttgtataatccacgatctatatgtgcttcagtgcgt
tga
DBGET
integrated database retrieval system
