Coffea arabica (coffee): 140035004
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Entry
140035004 CDS
T11342
Name
(RefSeq) amino acid transporter AVT1C-like
KO
K15015
solute carrier family 32 (vesicular inhibitory amino acid transporter)
Organism
carb Coffea arabica (coffee)
Pathway
carb04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
140035004
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carb02000
]
140035004
Transporters [BR:
carb02000
]
Solute carrier family (SLC)
SLC32: Vesicular inhibitory amino acid transporter
140035004
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Gene cluster
GFIT
Motif
Pfam:
Aa_trans
Motif
Other DBs
NCBI-GeneID:
140035004
NCBI-ProteinID:
XP_071930292
UniProt:
A0ABM4WER5
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Position
2c:9340743..9348724
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AA seq
551 aa
AA seq
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MKNSVSEQSFYIESDEEDEEKALEKEDSEDGNNSDSSTYSNEDERPESKSITTSWPQSYR
QSIDLYSSVPSPSLNFLGTPTLSRLGSSFISSSLTRRHTPEVLPSLQKPLLPPVADARQP
PERRSSHSLLPPMQRRPSLRKGTADRKSSKVSHEVSLPRQSSYGQAVVNGINVLCGVGIL
STPYAVKEGGWVGLSILFIFAVVSYYTGILLRSCLDSQPGLETYPDIGHAAFGNVGRIAI
SIILYAELYACCVEYIILESDNLSSLFPNAHLSLGGLELNSKHLFALLTTLTVLPTVWLR
DLTLLSYISAGGVIASILVVSCLFWVGLVDKVGFEPEGTVLNLSTLPVAIGLYGYCYSGH
AVFPNIYTSMEKPSQYPAVLLTSFGICTLMYAGAAVLGYLVFGESTKSQFTLNLPQDLIA
SKIAVWTTVVNPFTKYALTMTPVALCLEELIPANHMKSHIYSILIRTVLVVSTLIVGLSV
PFFGLVMALIGSLLTMLVTFILPCVCYLRILKGKTNQFQVAACVSVIIVGSVSSAFGTYS
AVSQIVENLIS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaagaattcggtatcagaacagagtttctacatagagagcgacgaggaagatgaggag
aaggcactggagaaagaagacagtgaagatggaaataattctgattctagcacttattct
aatgaggacgaaaggccggagagcaaatctatcaccacctcttggcctcaaagttacagg
cagtccatcgatttatacagtagtgtaccatctccaagtcttaacttcctggggacgcct
acattatcacgtttaggcagctcatttatctcttcttcattaacaagaagacacactcct
gaagtactcccttctttgcaaaaacctctattaccaccagtagcagatgcacggcagcca
ccagaaaggcgtagttcacattctctgctgccccccatgcaaaggaggccttccttaaga
aaaggaactgctgacaggaaatcatccaaggtctcacatgaggtttctcttcctcgccag
agttcatatggacaagctgtggtgaatggcataaatgttctttgtggtgttggaattctt
tcaactccttatgctgtcaaagaaggtggatgggttgggctatcaattctgtttatcttc
gctgttgtttcttactacactgggattctcctgcgttcctgtttggacagtcagcctggg
ctcgagacttacccggatattggccatgctgccttcggtaatgtgggacgtattgctata
tctattattttatatgcagaattatacgcttgttgtgttgagtatatcattctggagagt
gataacttatcatctctgtttcctaatgcacatttaagcttgggaggacttgaattaaat
tcaaaacacctatttgctttgctcactaccctcactgttctccctactgtttggctgcga
gatctcactctgcttagttacatctcagctggaggagttattgcttcaatattagtggtc
tcctgcttattctgggttggcttggtggacaaagttggctttgagcccgaggggaccgta
ttaaatctctcaactcttcctgttgctattggcctatatggttattgctactcaggccat
gcggtttttcccaatatctacacatcaatggagaaacctagccagtatcctgcagttctc
ttaaccagttttggaatctgtactctgatgtatgccggagctgccgtattgggatacttg
gtgtttggagaatcaacaaaatcacaattcactcttaacttgccccaagatttaattgcc
tccaaaattgctgtctggacaacggttgttaatccatttacaaaatatgctttaaccatg
actcctgtggccttgtgtctggaagaactgatacctgcaaaccacatgaagtctcacata
tactcaatcctcataaggacagtgctagttgtctctactctgattgtgggcctttctgtt
ccgttcttcggtctggtcatggcacttattggatctttactcacaatgctagtgacattt
atacttccttgcgtttgctatcttcgcatcttgaaaggaaaaacaaaccagttccaggta
gctgcttgtgtatcggtcataatagttggatctgtgtcatctgcttttggtacttactca
gctgtctcccaaattgttgagaacttgatcagttga
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