Coffea arabica (coffee): 140035013
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Entry
140035013 CDS
T11342
Name
(RefSeq) uncharacterized protein
KO
K03139
transcription initiation factor TFIIF subunit beta [EC:5.6.2.-]
Organism
carb Coffea arabica (coffee)
Pathway
carb03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140035013
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carb03021
]
140035013
Transcription machinery [BR:
carb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
140035013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_beta
TFIIF_beta_N
Tau95
WHD_UBR1
Motif
Other DBs
NCBI-GeneID:
140035013
NCBI-ProteinID:
XP_071930341
UniProt:
A0ABM4WEZ3
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Position
2c:9721583..9726170
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AA seq
299 aa
AA seq
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MAEKAAIAPNSTTNSYTCIENSNNNGIGRNGQLETSKAERHVWLMKCPPLVSRSLNQHHP
HDYSSSSSSSTTSSSLSFSSSSDGHIAKVVVAVDPLLPNDDFSSTQFTMELAGVESGNIP
KCYSMDMSTDFIPMSVFSESAQGKVSVEGKIYHKFDMKPHGKTIEDYGKLCRERTTKYMT
KTRQIQVIDDDSGQHLRPMPGLFGLKASGPQEKRKMPVKSSELKRTRRDRNEMEEIMFKL
FERQPNWTLKQLIQETDQPEQFLKDMLKLLCVYNNKGSNQGTYELKPEYRKSEDEPNCK
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaaagccgccatcgcccctaactccaccaccaacagttatacttgcattgaa
aacagcaacaataacgggattgggaggaatgggcagttggagacgagcaaagcggagaga
cacgtctggctaatgaaatgccctcccctcgtttctcgttctttgaaccagcatcatcct
catgactactcttcttcttcttcctcttctaccacttcgtcatcattgtcattttcgtct
tcttctgatgggcatattgccaaagtcgtcgtcgccgtcgaccctttactccccaacgac
gacttctcttctactcagttcactatggaattggctggcgtggaatctggaaacattccc
aagtgctattccatggacatgtcaacggattttattccaatgtctgtattctccgagtca
gctcaaggaaaggtttctgtggaagggaaaatctatcacaaatttgacatgaagcctcac
ggtaaaaccattgaggactatggaaaattatgccgtgagaggacaaccaaatacatgaca
aaaactagacagatacaggttattgacgatgatagtggtcagcatttaaggcctatgccc
ggattgtttggtctaaaggcttcaggacctcaagagaagaggaaaatgccagttaagagt
tcagagttgaaaagaacaagaagggaccgtaatgaaatggaagagatcatgttcaagctc
tttgaaaggcaaccaaattggacactaaaacaacttattcaggaaacagaccaaccagag
caatttctgaaagacatgcttaaacttctctgcgtatataataacaagggatcaaatcaa
ggcacttatgagctgaagcccgagtacaggaaatctgaagatgagccgaactgcaagtag
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