Coffea arabica (coffee): 140035154
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Entry
140035154 CDS
T11342
Name
(RefSeq) aspartate--tRNA ligase, chloroplastic/mitochondrial-like isoform X1
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
140035154
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
carb01007
]
140035154
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
140035154
03029 Mitochondrial biogenesis [BR:
carb03029
]
140035154
Enzymes [BR:
carb01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
140035154
Amino acid related enzymes [BR:
carb01007
]
Aminoacyl-tRNA synthetase
Class II (A)
140035154
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
140035154
Prokaryotic type
Other AARSs
140035154
Mitochondrial biogenesis [BR:
carb03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
140035154
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
140035154
NCBI-ProteinID:
XP_071931023
UniProt:
A0A6P6VEK2
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Position
2c:complement(18496997..18504558)
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AA seq
544 aa
AA seq
DB search
MAAQLLRALPSIAFRYKHFSLKPPPLPLLFLNSHSPSFKPTQPPKRCISTPSVSASSPSP
SSTETPLVAASPKVSRSIPSLEWVSRTAFCGELSEADVNKRVRLCGWVALHRVHGGLTFV
NLRDHTGVVQITTLPNEFPDAHSTVNDLRVEYVVAVEGVVRPRPIESVNKKMRTGAVEVA
AERVHVLNTVRSKLPFLVTTADDAKESVKEEIRLRYRCLDLRRPQMTSNIILRHQVVKLI
RRYLEDVHDFVEIETPILSRSTPEGARDYLVPSRIQPGTFYALPQSPQLFKQMLMVSGFD
KYYQIARCFRDEDLRADRQPEFTQLDMEMAFTPLEDMLRLNEDLIRKVFLEIKGVQLPDP
FPRLTYAEAMSQYGSDRPDTRFDLGLKDVSEIFSDSSFKAFADTLKSGGIVKALCVPSGG
KTYSNTALKKGDIYNEAIKSGAKGLPFLKVLEDGAIEGISPLVSCLDHTKKDKLLKHLSA
GSGDLILFAVGQPASVNKTLDRLRLYVAHDLGLIDPIFKPAENFRSHQNHKERWSCCSIQ
SSSD
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacaactcctccgcgctctgcccagtatagccttccgctataaacacttctca
ctcaaaccacctccattgcctcttctattcctaaactcgcacagccccagcttcaaaccc
acgcaacctcctaaacgctgcatttcaactccttctgtttctgcttcgtctccttctcct
tcttcaactgaaacaccacttgttgccgcttcccctaaagtatctcgctccatcccttct
cttgaatgggtgagccggaccgctttctgcggtgaattgtcagaagctgatgtgaataaa
cgggtcaggctctgcggctgggttgcccttcatcgtgttcatggtggcctcactttcgtt
aatctccgtgaccataccggtgttgtacagattacgacccttcccaacgaatttcctgat
gctcattcaacagtgaatgacttaagagttgagtatgtggtggccgtagaaggtgttgtt
cggcctcgcccaattgagtctgtcaacaagaagatgaggactggtgcagtagaggtggct
gctgagcgtgtccatgttctgaatactgtgagatctaagctgcctttcttagttactact
gcagatgatgccaaagaatctgtaaaggaggaaattcgcttgagatatcgatgccttgat
ttgcgccggccacaaatgacttccaacattatattgcggcatcaagtggtaaaactcatc
cgaaggtaccttgaggatgtacatgattttgtggagattgagactccaattctatctaga
tctaccccagaaggtgctcgggattatcttgtcccttcaagaattcagccaggaacattt
tatgccttgccccaaagtccgcagctgttcaaacaaatgttgatggtctctggttttgat
aaatactatcaaattgcaaggtgtttcagggatgaagatctaagggcagatagacaacct
gaatttacgcaactagatatggagatggctttcactcccttagaggacatgctcagactt
aatgaagatttgattaggaaggttttccttgagatcaaaggtgtccagctacctgaccct
ttcccaaggctcacttatgctgaagccatgagccaatacggttcagataggccagatact
cgttttgatcttggattgaaagatgtatctgagatattttcagattcctccttcaaggca
tttgcagataccttgaagagtgggggaattgttaaagccttgtgtgtcccttcaggagga
aagacatactcaaatactgctttgaagaaaggtgatatttacaatgaagctattaaatct
ggagcaaagggtttgcctttcttaaaggtgttagaagatggggcaattgaagggatttcc
ccactggtatcatgcttggaccacacaaagaaagacaagttactcaaacacttatctgcg
ggatcaggtgatctcatcttgtttgcagtgggtcagcctgcatcagtaaataaaacttta
gataggctgaggttgtatgtagcccatgatttgggcttgattgatcctatcttcaaacct
gcagagaatttccgaagtcatcagaaccataaggaacgatggagttgttgcagtattcag
tcgtcgtctgattga
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