Coffea arabica (coffee): 140036481
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Entry
140036481 CDS
T11342
Name
(RefSeq) protein EXPORTIN 1A-like
KO
K14290
exportin-1
Organism
carb Coffea arabica (coffee)
Pathway
carb03008
Ribosome biogenesis in eukaryotes
carb03013
Nucleocytoplasmic transport
carb03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140036481
03008 Ribosome biogenesis in eukaryotes
140036481
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140036481
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
140036481
03009 Ribosome biogenesis [BR:
carb03009
]
140036481
03016 Transfer RNA biogenesis [BR:
carb03016
]
140036481
03036 Chromosome and associated proteins [BR:
carb03036
]
140036481
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
140036481
Ribosome biogenesis [BR:
carb03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
140036481
Pre-60S particles
140036481
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
140036481
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
140036481
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
mTOR_dom
CD1375-like
TPR_TNPO3_IPO13_2nd
Motif
Other DBs
NCBI-GeneID:
140036481
NCBI-ProteinID:
XP_071934057
UniProt:
A0ABM4WQJ1
LinkDB
All DBs
Position
2e
Genome browser
AA seq
1075 aa
AA seq
DB search
MAAADKLRDLSQPIDVSLLDATVAAFYGTGSKEERTAADHILRDLQNNPDMWLQVVHILS
NTQNLNTKFFALQVLEGVIKYRWNALPVEQRDGMKNYISEVIVKLSSDEASFRRERLYVN
KLNIILVQILKHEWPARWRSFIPDLVAAAKTSETICENCMAILKLLSEEVFDFSRGEMTQ
LKIKELKQSLNSEFQLIHELCLYVLSASQRTELIRATLATLHAFLSWIPLGYIFESPLLE
TLLKFFPVPAYRNLTLQCLTEVAALNFGDFYNVQYVKMYNVFIMQLQAILPLTTNIPEAY
ANGSSEEQAFIQNLALFFTSFFKSHIRVLESAPENVNTLLMGLEYLINISYVDDTEVFKV
CLDYWNSLVLELFEAHHNSENAAATAMIGLQHMPMGLVDGLGSQLLQRRQLYAEPMSKLR
LLMISRMAKPEEVLIVEDENGNIVRETMKDNDVLVQYKIMRETLIYLSHLDHEDTEKQML
RKLNKQLNGEDWTWNNLNTLCWAIGSISGSMMEEQENRFLVMVIRDLLNLCEITKGKDNK
AVIASNIMYVVGQYPRFLRAHWKFLKTVVNKLFEFMHETHPGVQDMACDTFLKIVQKCKR
KFVILQLGESEPFVSELLTTLPTTIADLQPHQIHTFYESVGHMIQAEPDPQKRDEYLQRL
MELPNQRWNEIIGQARQSVDYLKDQDIIKAVLNILQTNTSVASSLGTYFLSQISLIFLDM
LNVYRMYSELISTSLAQGGPYAYRTSIVKLLRSVKRETLKLIETFLDKSEDQPQIGKQFV
PPMMDPILGDYARNLPDARESEVLSLFATIINKYKGAMIEDVPRIFEAVFQCTLEMITKN
FEDYPEHRLKFFSLLRAIATHCFPALIRLSSEQLKLVMDSIIWAFRHTERNIAETGLNLL
LEMLKNFQASEFCNQFFRTYFLMIEQEIFAVLTDTFHKPGFKLHVLVLQHLFCLVESSGL
TEPLWDASSVAYAYPNNAVFVREYTIKLLSTSFPNMTATEVAQFVNGLFESRTDLPTFKN
HIRDFLAQSKEFSAQDNKDLYAEEAALQRERERQRMLSIPGLIAPNEIQDEMVDS
NT seq
3228 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgccgacaagcttagggatttgtctcagccgattgatgtttccttactcgac
gccactgttgccgccttctatggcaccggatctaaagaagagagaactgctgcggatcat
attttgcgggacttgcaaaataatccagatatgtggcttcaagtggttcacattctatca
aatacccagaacttgaataccaaattttttgctttacaggttctagaaggtgtcatcaaa
tatagatggaatgcattgcctgttgaacaacgagatgggatgaaaaactatatctctgaa
gttattgtaaagctgtcaagtgatgaagcttcttttcgtcgtgaaagactttacgtcaac
aaattaaacattatattggttcagattttaaagcatgaatggccagctaggtggcgaagt
ttcattcctgatttagtggctgcagcgaaaacaagtgaaactatttgtgaaaattgcatg
gctatattgaaacttttaagtgaagaggtgtttgatttctcaaggggtgaaatgactcaa
ctcaagattaaagagctcaaacaatcgttaaacagcgagtttcaactcattcatgagtta
tgcttatatgtactatcagcatctcagagaactgagctcatcagggctacactggccaca
ctgcatgctttcctttcatggattcctctgggctacatttttgaatctccactgctcgaa
acacttcttaaattttttcctgttcccgcgtaccgtaatctcaccctccaatgtttgact
gaggttgccgctctaaattttggggatttctacaacgttcaatatgttaagatgtacaac
gtattcatcatgcaattgcaggccatactcccactcaccacaaatatacctgaagcttat
gccaatggtagcagtgaggagcaggcatttatccagaatttagcgttgtttttcacatct
tttttcaagtctcacatacgggtgctggaatctgccccagagaatgttaataccctgttg
atgggactagagtatctcattaacatctcatatgttgatgacactgaggtttttaaggtt
tgtctcgactattggaactccttggtcttggagctgtttgaggcacaccataattcggag
aatgctgcagccacagcaatgattggcctgcagcacatgccaatgggtcttgttgatggc
cttggctcgcagcttctgcagagacggcagctttatgctgagccgatgtcaaagttgaga
ttgctcatgatctcacggatggctaagcctgaagaagttctgattgttgaagatgaaaat
gggaacattgttcgtgaaactatgaaggataatgatgtccttgttcaatataagatcatg
cgagaaaccttgatatacttatcgcatctggatcatgaagacactgaaaagcagatgctg
aggaagttaaataaacagctgaatggtgaggattggacgtggaacaacctaaataccttg
tgctgggcaataggatctatatcaggatcaatgatggaggaacaggaaaacagatttctt
gtgatggtgatacgtgatttgttaaacctttgtgagattacaaaaggcaaagacaacaaa
gcagttattgcaagtaatataatgtatgtggttggtcagtatccaagatttctgagggct
cattggaagtttctgaaaactgttgtgaataagttgtttgagttcatgcacgagacacat
cctggagttcaggacatggcctgtgacacgttccttaaaattgttcagaaatgcaagcgg
aaatttgttatcctccagcttggagaaagtgaaccatttgtctctgaacttttgactact
cttccaacaacaattgctgatcttcagccccatcagattcacaccttttatgaatctgtt
ggtcatatgattcaagctgaacctgaccctcagaagagggatgaatacttgcagcggctg
atggagcttcctaatcagagatggaatgaaattattggacaagctcgtcaaagtgtggac
tacttgaaagatcaagatattataaaggcagttctcaacatattgcagacaaatactagt
gttgccagttcccttggaacctacttcttgtcgcagatttctcttatctttctggacatg
cttaatgtgtacagaatgtatagtgagcttatatccacaagccttgcgcaaggaggacca
tatgcttatagaacatccatagtgaaactcttgcgctcggtaaagcgggaaacgcttaaa
ctcatagagacattcttagataagtccgaagatcaaccacagataggaaaacaatttgtg
cccccgatgatggacccaattcttggtgattatgcccggaatttgcctgatgctagagaa
tcagaagttctctctctttttgccactataataaacaagtacaagggtgcgatgatagaa
gatgttcctcgaatatttgaagctgtttttcagtgtacgttggagatgatcacaaagaat
tttgaagattatcctgaacatcgcctaaaatttttttcgttgcttcgtgccattgctacg
cactgcttccctgctttgattcggttgtcaagcgagcaacttaaacttgttatggattcc
atcatttgggctttccggcatactgaaagaaacatcgctgaaacaggattaaatctcttg
ttagagatgctcaagaacttccaggcttctgagttctgtaatcagttcttccggacctac
tttttgatgattgagcaagagatttttgctgttctgacagacacatttcataaacctgga
ttcaaattgcatgttctagtactgcagcatttgttctgtctggtagagagtagtggattg
accgaacccctgtgggatgcatcctcagttgcatatgcatatccaaataatgcagtcttt
gttcgtgagtatacaattaaactcttaagtacatcgtttcccaacatgacagcgacagag
gttgctcaatttgtgaatgggctttttgaatcgaggactgaccttcccacattcaaaaac
cacataagagactttcttgcgcaatcaaaagaattttcagctcaggataacaaggatctt
tatgctgaggaagctgctctacagagagagagagagagacaaaggatgctttccattcct
gggctgattgccccaaatgagatccaagatgagatggtggactcatag
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integrated database retrieval system
