Coffea arabica (coffee): 140036597
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Entry
140036597 CDS
T11342
Name
(RefSeq) probable pectate lyase 4
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140036597
Enzymes [BR:
carb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
140036597
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Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
140036597
NCBI-ProteinID:
XP_071934653
UniProt:
A0ABM4WS86
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Position
2e:complement(7167514..7170901)
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AA seq
335 aa
AA seq
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MTTLPYADADSSLRALAGRAEGFGRFSVGGLHGPVYYVTSLADDGPGSLRDGCRRKEPLW
IVFAVSGTIHLSSYLNVSSYKTVDGRGQRIKLTGKGLRLKECEHIIICNLEFEGGRGHDV
DGIQIKPNSRHIWIDRCSLRDYDDGLIDITRQSTDITISRCNFTQHDKTMLIGADPSHVG
DRCIRVTIHHCFFDGTRQRHPRVRFGKVHLYNNYTRNWGIYAVCASVESQVYSQCNIYEA
GQKKKAFEYYTEKAADKQEAKSGLIRSEGDLFLSGAQAFLVAGCSEESMFHPSEFYPTWT
LEPASDSLKAVLQICTGWQSITLPAEESSSRAATA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacaacgttgccgtatgctgacgcagattccagcctgagagcattggccggtcgagcg
gaaggtttcggcaggttctcagttggtggcctccacggtccggtctattacgtcaccagt
ttggcagatgatggtccaggatcacttcgtgatggatgtcgtagaaaagaaccactttgg
attgtttttgcagtttcaggcaccattcatctctcgtcatacttgaacgtgtcatcttac
aaaaccgttgatggccgtggccaaaggataaaactgaccggcaagggcttgaggctgaag
gaatgtgagcacattattatatgcaacctggagtttgagggcggtagagggcatgatgtt
gatggcattcagataaagccgaattccaggcacatatggatagatcgatgtagtcttcgt
gattatgatgacggactcatagatataaccagacaaagtacagacatcactatttccaga
tgcaacttcacacaacatgacaagacaatgcttattggagcagatccatctcatgttggt
gatagatgtattagggtgactattcaccactgctttttcgatgggactcgtcaaaggcac
cctcgtgttagatttggaaaagttcatctgtacaacaattacaccaggaactggggcata
tatgctgtttgcgccagtgtagaatcacaagtatattctcaatgcaacatttatgaagct
gggcagaagaaaaaagctttcgagtactacacagagaaggcagcggataagcaggaggcg
aagtctggtctgataagatctgaaggggatttgtttctgagtggagctcaagcattctta
gttgcaggatgtagtgaagaaagcatgtttcatcccagtgaattttaccccacatggacg
ctggaacctgcctcagactctcttaaagctgttcttcagatttgcacaggctggcaatct
attacccttccagccgaagaaagcagcagccgtgcagcaactgcatga
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