Coffea arabica (coffee): 140036809
Help
Entry
140036809 CDS
T11342
Name
(RefSeq) calmodulin-binding transcription activator 2-like isoform X1
KO
K21596
calmodulin-binding transcription activator
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carb03000
]
140036809
Transcription factors [BR:
carb03000
]
Eukaryotic type
Other transcription factors
Others
140036809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140036809
NCBI-ProteinID:
XP_071935732
LinkDB
All DBs
Position
2e:complement(19460333..19470045)
Genome browser
AA seq
1062 aa
AA seq
DB search
MAGSGSQNLGFRFDIKQILSEAQHRWLRPAEICEILRNYQKFYITPEPPVKPASGSVFLF
DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDMLHCYYAHGEENENFQRRSYWML
EQDLMHIVFVHYLEVKGNKANIQCLKDAGTVSSNSQDDSSLSFGSPANSDRLASPYTDMT
SPTSTLTSACEDAESEINHPASSRFHPYLETTQEDFRGLENLDAGFSSSYNVLQSLGGQP
TSSASVHDGCTVDHPKSNFVPGVERTLDSASWEEVLGQCTTGMVGDGHKSWNAPAHQANW
QGDCLSPMQGVPLSQNLIPDSAYYGKGSLWEQKSISALLQSAADPFYMRPDGQEDEAVER
DVQKLRQNVEAGYMMSYKAETSVPSAGSGNCSLVLKQPHLSGIQAEESLKKVDSFSRWMA
KELGEVEELPLHSTNGYSWSVIQTEDVVGDSCTPTQLQLDADTLNFSLSQDQLFSITDFS
PNWAYSRLETKVLITGRFLKSGQEFTRYKWSCMFGELEVPAEVLSGGVLCCHAPPHKAGL
VPFYVTCSNRLACSEVREFEYRAGPSQEIDFADIPGSDAIEVHLQRRLEKLFLTGPIGST
QSVSETITDKKEVVNKIFLLMEAEYNQMATLSPRDVSPPNGIEEQHGEKLLKEKFYTWLI
QKVTEGGKGPSLLDDEGQGVLHLAAALGFNWAIKPVIISGISIDFRDVNGWTALHWAALC
GREDTVAVLVSLGAAPGALTDPSAEHPLARTPADLASANGHKGIAGFLAECSLTTHLSTL
TVKDSKDDDTLQYSEAKAIKTVSERVASPITEQDVPDSLSLKDSMAAVCNATQAAARIHQ
IFRIQSFQRKQLDIQHINESSSMDEHTLSLIAAKTSRLGKNDWTAHGAAISIQKKFRGWK
KRKEFLIIRQRIVKIQAHVRGHQVRKKYKTIIWSVGILEKVILRWRRKGSGLRGFRPDAV
AKCPSAENMPRKDDDYDFLKEGRKQTEERLQKALSRVKSMAQYPEARAQYRRLLTVAEGF
RETEDTSNPTLSGSEDVSYADEELFDVEKLSDHDTFMSMAFE
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atggccgggagcggatcgcaaaacctagggtttcgatttgatattaagcaaattttatca
gaagcacagcaccgatggctgagacctgctgaaatttgtgaaattctgcgcaactatcag
aagttttatattactcctgagcctccagtcaagccagctagtggatctgtctttctgttt
gatcggaaggtgctgagatacttccggaaagatgggcataactggaggaagaagaaggat
ggtaagactgtgaaggaggcacatgaaaagctgaaggttgggagtgttgatatgctacac
tgctattatgcccatggagaagaaaatgagaatttccaaagacgcagttactggatgctt
gaacaggatctcatgcatatagtttttgttcactacttggaggttaagggtaataaagca
aacattcaatgcctcaaggatgctggaacagtgtcatctaattctcaagatgacagttcg
ttgtcctttggttctcctgcaaattctgacagattggcttcaccatataccgacatgacg
agtcctacaagcactctaacatctgcatgtgaagatgctgaatctgaaattaatcaccca
gcaagttccagatttcatccatatcttgaaacaacgcaagaggacttcagggggttggag
aatttagatgctggcttctcaagctcttataatgtgcttcagtctttgggtggtcagcct
acttcttcggcttcagttcatgatggatgcactgttgatcaccccaaaagtaattttgta
cctggtgttgaaagaacactagattcagcatcttgggaagaggtcttggggcaatgtaca
acaggtatggttggtgatggacacaagtcctggaatgccccagcacaccaagcaaattgg
cagggagattgtttatcgcccatgcaaggagtgccacttagtcagaatctgattccggat
tcagcttattatggcaaaggaagtttatgggagcagaaatctatttctgcacttcttcaa
tctgctgcagatccattttacatgaggcctgatgggcaagaagacgaagctgtggaaagg
gacgtacaaaaactgcgacaaaatgtagaagccggatatatgatgagttacaaggctgag
actagtgtgccttctgcagggtctggaaactgttctttggttttgaaacagccacatctg
agtggaatccaagcagaagaaagcttgaagaaagtggacagcttctcccgatggatggct
aaagaattaggagaagttgaggaattgcctttgcactcaaccaatggatactcatggagt
gtgatacagactgaggatgttgttggtgattcctgtactcccacccagctgcaactggat
gcagacacattaaatttctcactctcccaagatcaactatttagcatcactgatttttca
ccaaattgggcttactcaaggttggagaccaaggtcctaattactggaagatttctcaag
agtggacaagagtttacaagatataagtggtcatgtatgtttggagaactggaggtgcca
gcagaagtcttatcaggaggagttctttgttgccatgcgccaccacacaaggctgggctt
gtcccattttacgtgacttgttcaaatcggttggcttgtagtgaagtacgagaatttgaa
tatcgagctggaccctcgcaggaaattgattttgcagatattcctggaagtgatgcaatt
gaggtgcatctccaaagacggctcgagaaattattcttgacaggaccgataggtagcacc
cagagtgtctctgaaactattactgacaaaaaagaagttgtcaataagatatttttattg
atggaggcagaatacaatcagatggcaactctgtcaccgagggatgtctccccacccaat
ggaatagaggagcaacatggtgaaaagctgttgaaggagaagttttacacatggctgatc
cagaaagtgaccgaaggtggaaaagggccaagtcttcttgacgatgagggtcaaggagtt
ttgcatttagcagctgctcttggttttaactgggccataaagccagtcattatttcagga
attagtatagattttcgtgatgtaaatggatggactgcacttcactgggctgctctatgt
ggcagggaggacacggttgctgttctggtctctcttggtgcggctcctggagcattaaca
gatccatctgctgaacatcctttggccagaactcctgcagaccttgcttccgcaaatgga
cacaaggggatagctggttttcttgctgagtgctccttgacaacacacctttcaacattg
actgtgaaagattcaaaggatgatgataccttgcaatactctgaagcaaaagctataaaa
acagtttcagaacgtgttgcatctccaattactgaacaggatgtgccagattcactgtca
ttgaaggattctatggctgctgtatgtaatgcaactcaagcagctgctcggattcatcaa
atttttaggattcaatcctttcagaggaagcagcttgatattcagcacattaatgagtca
tcatctatggacgagcatactctctctcttatagcagccaaaacaagcaggctgggtaag
aatgattggactgctcatggtgctgcaataagcattcagaaaaagtttcgtggttggaag
aagcgaaaagaatttctaattattaggcaaagaattgttaaaatccaggctcatgtacgg
gggcatcaggtgaggaagaagtataaaacaataatttggtcggtgggaatcctagagaag
gtgatattgcggtggaggcggaaagggagtggtttaaggggttttcgcccagatgcagtt
gccaaatgtccaagcgctgaaaacatgcccagaaaggatgatgattatgattttctaaag
gaaggaagaaaacagactgaagagaggttacaaaaagcactttctagggtcaagtccatg
gctcaataccctgaggcaagagctcaatacagaaggctgctaactgttgctgaaggattc
cgcgaaactgaggatacttccaacccgacacttagtggttctgaagatgtgagctacgct
gatgaggaactatttgatgttgaaaaattgtcggatcacgatactttcatgtccatggca
tttgaatga
DBGET
integrated database retrieval system
