Coffea arabica (coffee): 140037017
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Entry
140037017 CDS
T11342
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
carb Coffea arabica (coffee)
Pathway
carb04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
140037017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
carb04121
]
140037017
Enzymes [BR:
carb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140037017
Ubiquitin system [BR:
carb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
140037017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140037017
NCBI-ProteinID:
XP_071936651
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Position
2e:complement(48255048..48258305)
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AA seq
305 aa
AA seq
DB search
MSTGNCYFDDLRNKPEVIDPAQDEELLEVSEHMNDATQIAVKPNLTVSSSVRELLECPVC
LNAMYPPIHQCSNGHTICSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF
GCMGIYPYYSKLKHESQCSFRPYNCPYAGSECTVIGDIPYLVAHLKDDHKVDMHNGSTFN
HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQHGMAPVYIAFLRFMGDDNEAKNYS
YSLEVGGNGRKMIWQGIPRSIRDGHRKVRDSFDGLIIQRNIALFFSGGDRKELKLRVTGR
IWKEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgtcaactggaaattgttatttcgatgacttgcgcaacaaacctgaggtcattgatcct
gctcaggatgaagaattactggaagttagcgagcacatgaatgacgctactcaaattgct
gtgaaacctaatctgactgtttctagcagtgttcgtgagttgttggaatgtcctgtctgc
ttgaatgcaatgtaccctcctattcaccagtgctcgaatgggcacaccatttgttctggt
tgcaagcctagggtgcacaaccgctgcccaacctgcaggcatgagcttggcaatatcaga
tgtcttgcattggagaaggtggccgcatcccttgagcttccttgtaaatatcagagtttt
gggtgcatgggcatatatccttattacagcaagttaaagcatgaatctcaatgttcgttt
agaccctacaactgcccctatgcaggatctgagtgcacggtcattggtgacattccctat
ttggtggcccatctaaaggatgaccacaaagttgatatgcacaatggcagtacttttaac
catcgttatgtcaaatcaaatccacatgaagtggagaatgctacatggatgctcacagtt
ttcagttgctttgggcaatacttctgcttgcattttgaagcatttcaacatggtatggcg
ccagtttacatagcattcttgaggttcatgggtgatgacaatgaggccaaaaactatagc
tatagtctcgaggttggcgggaatggcagaaagatgatatggcagggaattcctagaagc
ataagagatggccaccgcaaagttcgtgacagttttgatggcctcattatccaacgtaac
atagccctgtttttctctggcggggatcggaaggaattgaagctcagagtcacaggtagg
atttggaaagagcagtga
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