Coffea arabica (coffee): 140037036
Help
Entry
140037036 CDS
T11342
Name
(RefSeq) multisubstrate pseudouridine synthase 7-like isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
carb Coffea arabica (coffee)
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carb03016
]
140037036
Enzymes [BR:
carb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
140037036
Transfer RNA biogenesis [BR:
carb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
140037036
Prokaryotic type
140037036
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140037036
NCBI-ProteinID:
XP_071936791
LinkDB
All DBs
Position
2e:complement(64889355..64902690)
Genome browser
AA seq
711 aa
AA seq
DB search
MLQHRKVKPCCSFSKGYYSHSAISSRMKSIDESDVGIFCYISQLPGFRGILKQRYSDFIV
NEVDLEGNVVHLTSLEAPAELVEEKEVLVADQPNKNYDAEIGSFRALAGDFNAGMLKALL
DQTVSGGGVEIEPIVLSPSSDKSHRTAVHNFFKEKLKFLVTDTIDGPDATSKCIRVRLNG
GKSHGRHSFKKRKDRDDKPYDGRGSDNWPEHLGKYLRFHLYKENKDTQEALGLIGKMLGI
QPRSFGFAGTKDKRSISTQRVTVFKQRANRLAALNERLIGIKVGDFCHVNDGLLLGQLHG
NRFTVTLRGVVAESEAVIEASANALGKLGFINYFGLQRFGSGSVPTHLIGATLLRGEWKN
AVDMILDPREGEKEAVGKVREYYKDTGDIEGTLRQLPRHLVAERAILQRLKRSPGNYLQA
LKSIPRTLRMMYIHSYQSYLWNHAASMRVQKYGIDHVVLGDLVYCKEHCREAERGANYSE
FEDGSSNDTSNHIDEISEADLPEEKDVTVKVITEEDLSAGTYTVDDVVLPLPGSKVIYPM
NDIEEVYCDLAKKDAIGLTESVHGVKEFSITNITGAYRRVFLKPKEFEWELLTYKDGNIP
LAETDMDLISKSQKLKNVRGEDCGNGKAGEQLIDNGRQSCVSAIMDSAEDEAGSDRAGSH
QTEVYDSADIEESQKALRLSFTLPASGYATMAIRELLKTSTSVAFHKTLNP
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaacaccgaaaggtaaaaccctgctgcagtttttctaaagggtactacagccac
tctgcaatatcatcaagaatgaaatccattgatgaatctgatgttggaatcttttgctac
atctctcagcttccggggtttcgtggaatcctcaaacaaaggtactcagatttcatcgta
aatgaagtggatttggaaggtaatgttgttcatttgacctcattggaggctccagctgag
cttgtagaagaaaaggaagtattggtagctgatcagccaaacaagaattatgatgctgag
ataggatcttttagagctcttgctggtgatttcaatgctggcatgttgaaagcattatta
gatcagactgtttctggtggtggggttgagattgagcccattgtactatctccaagttct
gataagtcccaccgaacggcggtgcataacttctttaaagagaaattgaaattccttgtc
actgacacaatagatggaccagatgccacatcaaagtgcattcgagtaaggttaaatggg
ggaaagagtcatggaaggcacagcttcaagaaaaggaaagacagagatgataaaccttat
gatggtagaggttctgacaattggccagagcatctcgggaaatacttaaggtttcatctt
tacaaggaaaacaaggacacacaggaggcactagggcttattggcaagatgcttgggatt
cagccaaggtcctttggatttgctggtacaaaggataagcgctccatatcaactcaaagg
gtaactgtttttaagcagcgagcaaatagattagctgcactcaatgaaagattaattggt
atcaaagttggagacttttgtcatgttaatgatgggcttcttctcggtcagcttcatggc
aatcgttttacagtcacattaaggggagtggttgcagaatccgaagctgttatagaagca
tctgcaaatgcattgggaaagcttggattcattaactactttggcttgcagagatttgga
agtggttctgtccccacccaccttattggagctaccttgctgcgtggggagtggaagaat
gctgtcgacatgatccttgatccaagagaaggggagaaggaagctgtaggaaaggtaagg
gagtattataaggatactggggatattgaagggacgctaaggcaattacctcgccatcta
gttgctgaaagggcaatacttcagcgtctgaagagaagtccagggaactacttacaagcc
ctaaaatctatacctaggacgcttagaatgatgtacatacatagttatcaaagctatctt
tggaaccatgcagctagtatgagagtgcaaaaatatggaattgatcatgttgtgttgggg
gacttggtgtattgcaaagaacattgtcgtgaagcagaaaggggggccaattattctgaa
tttgaagatggtagctcaaatgacacctctaatcatatagatgaaatctcagaagctgac
ctcccagaagaaaaagatgtaacagtaaaggtgataactgaggaagatttaagtgctggg
acttacacggtagatgatgttgtccttcctttaccagggtcaaaagtgatttatccaatg
aacgatattgaagaagtttattgtgacttggcaaagaaggacgctatcggcttgacagag
agcgtgcatggtgtcaaggagttttcaataaccaacattactggagcttacaggcgggta
tttctaaagccaaaggaatttgaatgggaattgctcacctataaagatggaaacattcct
ttagcagagacagatatggacttaatttccaagtcacaaaagttgaaaaatgtcagaggg
gaggattgtgggaatgggaaggcaggtgaacaattgattgataatggaagacaatcatgt
gtgagtgccatcatggattcagctgaagatgaggcaggaagtgatagagcagggtctcac
caaactgaagtatatgattctgctgacatcgaggagagtcagaaggctctcagattgagc
tttacccttccagcttctggttacgcgacaatggctataagggagctgctgaagacatca
acttctgttgcgtttcacaagacattgaacccttga
DBGET
integrated database retrieval system
