Coffea arabica (coffee): 140038159
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Entry
140038159 CDS
T11342
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140038159
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140038159
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
CfAFP
ZirS_C
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
140038159
NCBI-ProteinID:
XP_071939351
UniProt:
A0ABM4X5N3
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Position
3c:complement(43830295..43832092)
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AA seq
392 aa
AA seq
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MAYPRKLFSLALPFLFFFSSSASTITYNVQKFGAKPDGKTDSTKAFLSAWAAACASVKSA
TIYVPRGRYLLGAASFWGNTCKNNAIKISIDGTLVAPSNYRTIGYAGNWLKFERVNGVTI
SGGTLDGQGISLWNCKASKSNCPGGATTLAFYNSNNIVISRLTSLNSQMFHVMLYGCQNA
KLQGMKISASATSPNTDGIHISGSSGVTILGSNIATGDDCISIGPGTSNLWIENVSCGPG
HGISIGSLGWDMQEPGVQNVTVKTVTFRDTQNGLRIKTWARPSNGFVKRILFQNAVMLNV
RSPIIIDQSYCPSKNNCPNQGSGVKISDVTYQQIHGTSSSQVAIAIDCSKDSPCSGIRLQ
DVNLRYMNQPAQASCSNVAGTSSGFVQPKGCL
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggcctatccaagaaaactcttttcactcgcattgccctttttgttcttcttctcatca
tcagcctccacgatcacatataatgtgcaaaagtttggagccaaacctgatggaaagact
gattcgactaaggcctttctcagtgcatgggcagcagcttgtgcttcagtaaagtctgca
acaatttatgtaccgcggggaagatacttgctcggggctgcatcattctggggaaataca
tgcaagaataatgcgattaaaataagtatagatggtactcttgtagctccctcgaattat
cgtactattggctatgctggcaactggctcaagtttgaaagagtcaatggagtgacaatt
tctggcggaactttagatggacaaggcattagtctttggaactgcaaagcctccaagagt
aactgtcctggtggtgcaacgacattggcattctacaattcaaataacattgtcatcagc
agattaacgtcactgaacagccaaatgttccatgttatgctttacggctgtcaaaatgct
aagctacaaggaatgaagatctcagcctcagccactagtccaaatactgatggcattcat
atatcagggtcctcaggtgttaccatattgggctctaacatagctacaggcgacgattgc
atttcaattggccccggcacctccaatttgtggattgagaatgtttcttgtggccctggc
catggaataagcattgggagtctaggatgggatatgcaagaacctggagtacaaaatgtg
actgttaaaactgttactttcagagatacacaaaatggtttgaggataaagacttgggca
aggcctagcaatggatttgttaagaggatccttttccaaaatgcagtaatgctgaatgtg
agatcccctattatcatcgaccaaagttattgtccaagcaaaaataattgtccaaatcag
ggttctggtgtaaagattagtgatgtgacttatcagcaaattcatggaacatcatcatca
caagtagctatagcgattgattgcagcaaggactccccctgcagtggcataagattgcaa
gatgtcaacctcagatacatgaatcaaccagctcaggcatcatgctccaatgttgctgga
acttcttcaggctttgttcaaccaaaaggctgtttatga
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