Coffea arabica (coffee): 140038589
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Entry
140038589 CDS
T11342
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
carb Coffea arabica (coffee)
Pathway
carb00040
Pentose and glucuronate interconversions
carb01100
Metabolic pathways
Module
carb_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
140038589
Enzymes [BR:
carb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
140038589
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
ZirS_C
Motif
Other DBs
NCBI-GeneID:
140038589
NCBI-ProteinID:
XP_071940075
UniProt:
A0ABM4X7Q9
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Position
3e:48165702..48168595
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AA seq
396 aa
AA seq
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MNSKMRFLAIPFLFFSFLLSAAKSVTYNVQSYGAKSHGRSDSTNSFLSAWAAACASVAPA
TIYVPPGRFLVGGASFWGQNCKNNAITIRIDGTLVAPSDYNVLGHSGNWLKFETVNGLSI
YGGTLDGQGTGLWACKNSGKHCPQGATTLGFTNSNNIAIAGLTSLNSQLFHLVFNGCNTV
KLQGVKVSAAGNSPNTDGIHVQYSSGVTILNSKISTGDDCVSIGPGTTSLWIENVLCGPG
HGISIGSLGKDFEEEGVQNVTVKNVTFKNTQNGVRIKSWGRPSKGFVKDVLFQHATMINV
QNPIIIDQNYCPDNINCPGQVSGIKINDVTYQDIHGTSATEIAVKFDCSKKNPCSGIRLE
DVKLTYKNQPAKSSCANAAGTTLGLLGPAGTTLACG
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaaaatgagatttctcgctatcccatttctcttcttttccttcctcttgtca
gcagcaaagagtgtaacgtacaatgtgcagagttacggggcgaaatctcacgggagaagt
gattccacgaattcttttctgagtgcatgggctgcagcttgtgcctcagttgcgcctgca
acaatctatgttccaccgggaagatttttggttggtggagcctcattttggggccaaaat
tgcaagaacaatgctataaccattcgcatcgatggaacccttgttgctccatctgattat
aatgttcttggacattccggtaactggctcaagtttgaaacagttaatggactttcgatt
tacggtggaacccttgatggccaagggactggtctctgggcttgcaaaaactccggcaag
cattgtcctcagggagcaacgacattgggatttaccaactcaaacaacattgcaattgcc
ggccttacttctctcaatagccaattattccacttggtgttcaacggctgcaataccgtg
aaactgcaaggagtaaaggtttcggcggccggaaacagccccaacacggacgggattcat
gtgcaatattcatcaggagtcacaatcttgaattccaagatcagtactggagatgactgc
gtttcaattggccctggcactactagtttgtggattgaaaatgttctttgtggccctggc
catggtatcagcattgggagtcttggaaaagattttgaagaagagggagtccagaatgtg
actgtaaaaaatgttacattcaagaatacacagaatggtgtaaggattaaatcatggggt
aggccaagcaaaggttttgtcaaggatgttttgttccagcatgccactatgatcaatgtc
caaaaccccatcattattgatcagaactattgcccagataacatcaactgtcctggccag
gtgtctggcataaaaataaatgatgttacgtatcaagacatccacggaacatcagcaaca
gaaattgcagtcaaatttgattgtagcaagaagaatccatgcagcggaataagattggaa
gatgtgaagttgacatacaaaaatcaaccagccaaatcatcttgtgccaatgctgctgga
actacacttggtctgcttggccctgctggaactacacttgcgtgcggctga
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