Coffea arabica (coffee): 140038814
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Entry
140038814 CDS
T11342
Name
(RefSeq) probable serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit TON2
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
carb Coffea arabica (coffee)
Pathway
carb03015
mRNA surveillance pathway
carb04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
carb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
140038814
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
140038814
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
carb01009
]
140038814
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
carb03019
]
140038814
03036 Chromosome and associated proteins [BR:
carb03036
]
140038814
Protein phosphatases and associated proteins [BR:
carb01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
140038814
Messenger RNA biogenesis [BR:
carb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
140038814
Chromosome and associated proteins [BR:
carb03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
140038814
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_1
EF-hand_7
EF-hand_5
EF-hand_8
SPARC_Ca_bdg
EF-hand_13
IGFBP
Motif
Other DBs
NCBI-GeneID:
140038814
NCBI-ProteinID:
XP_071940305
UniProt:
A0A6P6X051
LinkDB
All DBs
Position
3e:complement(1789107..1795296)
Genome browser
AA seq
482 aa
AA seq
DB search
MYCGSIDGEGHDAAASGGPARKIPPASSMLWVRNLRRYVGSDSGLGSEAVMELETKRILL
DIFKEKQQKSAEAGTIPSFYKKKPEEGSISHRVERLAKYRFLKKQSDNLLNADDLDAMWV
CLRENCVIDDATGAEKMNYEDFCHIASVCTEQIGSKCRRFFSPSNFMKFEKDESGRIAIL
PFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPAAFVQMY
CRIAAHKFFFFCDPNRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENWFSLTSA
QRICDMFLALDKDMNGTLSKQELREYADGTLTDIFIERVFDEHVRRGKTGGGNSREMDFE
SFLDFVLALENKDTPEGLTYLFRCLDLHGKGCLTTADIHTLFRDVHQKWIEGGNYELCIE
DVRDEIWDMVKPADPLRITLADLLACKQGGTVASMLIDVRGFWAHDNRENLLQEEEEPEE
EG
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtactgcgggtcaatcgatggagaaggccacgacgccgccgcctccggtgggcctgct
aggaagatcccaccagcctcgtccatgctatgggtccgtaacctccgccgctacgtcgga
tccgactctgggctaggctccgaagccgtcatggagcttgaaacaaagagaattttgctg
gatatttttaaggagaagcaacaaaagagtgctgaagctgggacaattccaagcttctat
aagaagaaacctgaagaaggatctatcagtcatagggtggagcgcctagcaaaatatcga
tttctgaagaaacaatctgataatttgctaaatgctgatgatctggatgcaatgtgggtt
tgtctacgtgagaattgtgtgatcgatgatgcaactggagctgaaaagatgaattatgaa
gacttttgccacattgcttctgtatgtacagaacaaataggctccaagtgtcggcgattt
ttcagtccttcaaatttcatgaagtttgagaaggatgaatctgggagaattgctattctg
cctttttacctttatgtgatgcgcacagtatcacttactcaggccaggattgatatgagt
gagcttgatgaggattctgatggcttccttcaacctcatgaaatggaagcctatatacga
ggtcttattccaaatttggcacagctccgggacatgcctgctgcttttgttcaaatgtac
tgccgtatagctgcacacaagtttttcttcttctgtgaccccaatagacgaggaaaggca
tgcataaagaaggtgcttcttagtaactgtctccaggagctaatggaactacaccaggaa
agcgaggaagaagttactgatactgaacaagccgaaaattggttctcattgacttctgct
cagcgcatttgtgatatgttccttgcacttgacaaggacatgaatggaaccttaagcaaa
caagagcttcgagaatatgcggatggtacattaacagatattttcatcgagagagttttt
gatgagcatgtccgacgagggaagactggaggtggtaattcccgggagatggattttgag
agttttcttgattttgttctggcactagagaacaaagacactccagaaggactaacgtat
ttgtttcggtgtcttgaccttcatgggaaggggtgtctcacaacagctgatattcacaca
ttattcagggatgtacatcagaaatggattgagggagggaattatgagttgtgcattgag
gatgtgagggatgaaatttgggatatggtgaagccagcggaccccttgaggataacattg
gctgatctactggcttgcaaacagggtgggactgttgcgagcatgcttatagatgtgcgt
ggtttctgggctcatgacaacagagagaatcttcttcaggaagaggaagaaccagaagaa
gaagggtaa
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