Carnobacterium sp. CP1: NY10_1021
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Entry
NY10_1021 CDS
T04230
Name
(GenBank) ATP-dependent DNA helicase UvrD/PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
carc
Carnobacterium sp. CP1
Pathway
carc03420
Nucleotide excision repair
carc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NY10_1021
03430 Mismatch repair
NY10_1021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_1021
Enzymes [BR:
carc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NY10_1021
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NY10_1021
MMR (mismatch excision repair)
Other MMR factors
NY10_1021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
Terminase_6N
FWWh
DUF6024
DEAD
Motif
Other DBs
NCBI-ProteinID:
ALV21632
UniProt:
A0A0U3PMM5
LinkDB
All DBs
Position
complement(1043781..1046021)
Genome browser
AA seq
746 aa
AA seq
DB search
MVLRKNLLDGMNPGQKEAVAHTEGPLLIMAGAGSGKTRVLTHRIAYLIEEKGVNPWNILA
ITFTNKAAKEMKERVGRLLEGGNDVWVSTFHSMCVRMLRRDVDRIGYNRAFTISDPGDQQ
TLMKRILKERDIDPKKYNPRAILSEISNAKNELMTAEDYRKIANSFFEKMVADCYDDYQK
ELRRNQSVDFDDLIMLTIRLFEESPETLDYYQNKFHYIHVDEYQDTNTAQYTLVNMMAKR
FKNLCVVGDADQSIYGWRGANMNNILDFEKDYPDTKLVMLEQNYRSTKFILKAANDVIAN
NTKRKVKKLWTDNDDGEKLTYYRGQSEGDESRYVVAKMLEEMKENNYNYGDFAVLYRTNA
QSRVIEESLLKSNIPYKMVGGHKFYDRKEIRDVLAYLRLIANPEDNMSFERTVNTPKRGI
GPGTIEKLRTFANQYEWSLLETALNVSITSITGKAAKELEGFAFMLRDLRKMQEYLPVTK
LVEEVLERSGYLKSLEMERTLESETRVENIKEFLTVTQQFEKDSSEDKSLLTFLTDLALI
SDLDNIEEEPQSEVTLMTLHAAKGLEFPVVFLIGLEEGIFPLSRSMMEEDDLEEERRLAY
VGITRAEQKLYITNAYSRVLYGRVQSNQASRFIREITDEVMESGNIQSAGTGSFNRPATA
NTPFRSNQAARANSTPYQAPVNNKTESGADKLGWSVGDKAVHKKWGVGTVVKVTGDANNL
QLDIAFKEQGIKRLLAAFAPIEKATP
NT seq
2241 nt
NT seq
+upstream
nt +downstream
nt
ttggtattacgaaaaaatttattagatggcatgaatccgggacaaaaagaagccgtggct
catacagaaggtcctcttttaattatggcaggagccggcagtgggaagacgcgtgtgtta
acgcatcgcattgcttatttgattgaagaaaaaggcgtgaatccttggaatattttagca
attacatttactaataaagcagcaaaagaaatgaaagaacgggtggggcgtctattagaa
ggcggaaacgatgtctgggtttcaactttccactcgatgtgtgttcggatgctgcgtcga
gatgtcgaccgaatcgggtacaatcgagcttttacgatcagtgaccctggcgaccagcaa
acactgatgaagcgtattttaaaagaacgcgatatcgatccgaaaaaatacaatccacgg
gcgatcttatctgaaatcagcaatgctaaaaatgaactgatgacggctgaagattaccgt
aaaatagcgaacagtttttttgaaaaaatggtggctgattgctacgacgattaccaaaaa
gaattgcgtcgtaatcaatcggtcgattttgatgatttgatcatgctgacgattcgctta
tttgaagaaagtcctgagacattggattattatcaaaataaattccactacattcatgtg
gatgagtaccaagataccaatacagctcaatacacgttggtcaatatgatggcgaaacgc
ttcaaaaacctttgtgtcgttggagatgcagaccaaagtatttacggttggcgcggtgcc
aatatgaacaatattttagattttgaaaaagactatccagatactaaattggtgatgttg
gaacaaaattatcgttccacgaagtttattttgaaagcagccaatgacgtgattgccaat
aacactaaacgcaaagtaaaaaaattatggaccgataacgatgatggcgaaaagctgacg
tattaccgggggcaatcagaaggcgatgaatcccgctacgttgttgctaaaatgctggaa
gaaatgaaagaaaataattacaattacggggattttgccgtattgtaccgaaccaatgcc
caatcacgggtaattgaagaaagtctattgaaatccaatattccgtataaaatggtcggc
ggacataagttctacgaccgtaaagagattcgtgatgtcttagcttacttgcggttgatc
gccaatcctgaagacaacatgagttttgaacggaccgtcaatacacctaaacgaggcatt
ggtccaggaacgattgagaagttgagaacttttgcgaaccaatacgaatggtctttactg
gaaacggcgttgaatgtttcgatcacttcgatcacaggtaaagcggctaaagaactagag
ggttttgctttcatgctgcgcgacttgcgtaagatgcaagaatacctgcccgttacgaaa
ttagtcgaagaagtcctagaacgcagcggctatttgaaatcgctggaaatggaacgtacc
ttagaatctgaaactcgagtagagaacatcaaggaattcttgacggttactcaacaattt
gaaaaagacagcagtgaagataaaagcttgctgactttcttgaccgacttagcattgatt
tctgatttggataacattgaagaagagccgcaaagcgaagtcactttgatgactttgcac
gctgctaaaggattggaattcccagtggttttcctgattggcttggaagaaggtattttc
ccgttgtcgcgttcgatgatggaagaagacgatttggaagaagaacggcgcttagcttat
gtggggatcacacgtgcagagcaaaaattgtacatcaccaatgcttattcacgagtattg
tatggtcgtgtccaaagcaaccaagcttcacgctttattagagaaatcacggatgaagtg
atggagtccggcaatatacaatcagcaggtacaggttcatttaaccgtccagcaacggct
aatactccgtttcgcagcaatcaagcggcacgtgcaaacagcacgccttatcaagcgcct
gtcaataacaagaccgaaagcggcgcggataaattaggctggtctgtcggcgataaagcc
gtgcataaaaaatggggagttggaacggtagtgaaagttaccggagatgccaataacctt
caattggatattgcttttaaagaacaaggcatcaagcggttgttagccgcctttgcaccg
atcgagaaagcaacaccttaa
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