Carnobacterium antarcticum: NY10_1298
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Entry
NY10_1298 CDS
T04230
Name
(GenBank) Exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
carc
Carnobacterium antarcticum
Pathway
carc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NY10_1298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_1298
Enzymes [BR:
carc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
NY10_1298
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
NY10_1298
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
ALV21906
LinkDB
All DBs
Position
1351393..1352145
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AA seq
250 aa
AA seq
DB search
MKFISWNVNGLRAIVKKGFLDIFNELDADFFCLQETKLQEGQIDLQLPGYYDYWNYAEKK
GYSGTAIFTRHKPLDVFYGIGKNEHDSEGRVITLSYPDYYVVTCYTPNSQSELARLDYRM
SWEEDFLAYLNQLDSEKPVILCGDLNVAHENIDLKNWKTNRKNAGFSDEERMKFKTLLNH
GFIDTFRYFYPTLEGVYSWWSYRFNARKNNAGWRIDYFCVSERLKDQLEDAKIHTEIMGS
DHCPVELTLK
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatctcttggaacgtaaacggtttgcgtgcgattgtaaaaaaaggtttttta
gatattttcaatgagctggatgcagattttttctgcttacaagagaccaaactgcaagaa
gggcaaattgacttacaacttccgggttattacgattactggaattatgctgaaaaaaaa
gggtattctggaacagctatttttacgagacataaacccctagatgttttttacggcatc
ggaaaaaatgaacacgactcagaaggccgagtcattacattaagctaccctgattattat
gtcgtaacttgttatacccctaactctcaaagcgaactggcccggttagattatcggatg
tcctgggaagaagattttttagcttacttaaatcaattggatagtgaaaaacctgttatt
ctctgtggtgatttaaatgttgctcatgagaacattgatttaaagaattggaaaaccaat
cgtaaaaatgccggtttttctgatgaggaacgcatgaaattcaaaaccttattaaatcat
ggatttattgatacgttccgttacttttatccaacccttgaaggcgtctattcttggtgg
agttaccgatttaacgctcgtaaaaataatgccggctggcggatcgattacttttgtgtc
tcagaaagactcaaagaccagcttgaagacgctaaaattcacaccgaaatcatggggtct
gatcattgccctgtcgaactaacgttaaaataa
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