Carnobacterium sp. CP1: NY10_1629
Help
Entry
NY10_1629 CDS
T04230
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carc03016
]
NY10_1629
Enzymes [BR:
carc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NY10_1629
Transfer RNA biogenesis [BR:
carc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NY10_1629
Prokaryotic type
NY10_1629
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ALV22228
LinkDB
All DBs
Position
complement(1685257..1685997)
Genome browser
AA seq
246 aa
AA seq
DB search
MRNIKMSIEYDGGRYQGWQRLGDSDKTIQGKIENILSEMTKTNIEIVGSGRTDAGTHAKG
QVANFKTTSNLDLVAMRDYLNTYLPRDIIVKELEEVPERFHARYNVVGKKYSYYVWNTAV
PSAFERNYSYHYPEQLDVDRMNEACSKLIGTHDFIGFSSLKKTKKSTVRTIDEITIHREG
DLLNFTFIGEGFLYKMVRIIMGTLLEIGAGTKSPECIDAIFKSGVRSDAGMTVPSQGLFL
DEVYYD
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacattaaaatgagcattgaatatgacggcggcagataccagggatggcaaaga
ctaggggattctgacaaaaccattcaagggaaaatagagaatatcctgtcggaaatgacg
aaaaccaacattgaaatcgtcggatcaggccggacagatgccggaacccatgccaaggga
caggtagccaatttcaagacgacatctaacttggatttggtggcgatgcgggattatctg
aacacttatctcccacgagatattatcgttaaagaattggaggaggttcctgaaaggttc
catgcccggtataatgtcgtcggtaaaaaatacagctattatgtctggaatactgctgta
ccatctgcatttgaacgcaattatagctaccattaccctgaacaacttgatgtcgatagg
atgaatgaggcttgcagcaagcttatcggaacccatgacttcatcggtttctcttcgctc
aagaagacgaaaaagtcgacggtcaggactattgatgaaattacaatccacagagaaggt
gatttgctgaactttacgtttataggggaaggcttcctgtataaaatggttagaatcatt
atggggacgctcctggaaatcggggcaggaacaaaaagtccagaatgcattgatgccatc
tttaagagtggggtcagaagtgatgccgggatgaccgtgccttctcaaggactgttctta
gatgaagtttattacgattga
DBGET
integrated database retrieval system
