Carnobacterium sp. CP1: NY10_1713
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Entry
NY10_1713 CDS
T04230
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_1713
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NY10_1713
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Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Rubredoxin_2
ChlI
DnaB_C
AAA_16
AAA_22
Lon_C
ABC_tran
RecA
AAA
AAA_30
Rad51
SLFN-g3_helicase
AAA_24
NTPase_1
nSTAND3
AAA_5
DZR
AAA_14
CbiA
AAA_19
MeaB
ATPase_2
SRP54
MCM
GvpD_P-loop
NACHT
AAA_31
IstB_IS21
HypA
Zeta_toxin
divDNAB
DAP3
Ribosomal_L44
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
ALV22311
UniProt:
A0A0U3MY33
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All DBs
Position
complement(1757947..1759320)
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AA seq
457 aa
AA seq
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MVAKKIATKFVCQACGYESPKWMGRCPNCGAWNQMEEEIIADKNNRRSRVSMAGKTAKAQ
AIEDITVSKIPRVKTKLAELNRVLGGGVVPGSMVLIGGDPGIGKSTLLLQVSAQLNQAGG
KVLYVSGEESAGQLKMSANRLGVKGSDFYIYPETDMAAIRQTIEEIQPDFVIIDSIQTMS
QPDVSSVVGSVSQVRESTADLMKIAKTNNIAIFIVGHVTKEGSIAGPKMLEHMVDTVLYF
EGDRHHTFRILRAVKNRFGSTNEIGIFEMREGGLVEVVNPSEMFLEERLAGATGSAVVSA
MEGTRPILVEIQSLITPTVFGNAKRTVSGLDHNRVSLIMAVLEKRAGLLLQNQDAYLKAA
GGVKLDEPAIDLAIAVSIASSYQEKETRPKDCFIGELGLTGEVRRVSRIDQRVQEAAKLG
FTRLFIPKNNIGGWTFPEGIEIVGVTTIADTIRKAFA
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
ttggtggcaaaaaaaatagcaacaaagtttgtctgccaggcttgtggatatgaatcccca
aaatggatgggccgctgcccaaactgtggcgcatggaaccaaatggaagaagaaataata
gcagataaaaacaatcgtagaagccgagtcagtatggctggtaaaacagctaaggcacag
gctatagaagacattaccgtttctaaaatccccagagtaaaaactaagctagctgaactg
aaccgtgtattaggcggaggagttgttcctggatcaatggtgttgatcggtggagacccg
ggtatcggaaaatctactttgctgctgcaagtctctgcccagctcaatcaagcaggcgga
aaagttctttatgtatcaggcgaagaaagtgccggccaattgaaaatgagtgccaatcgt
ttaggtgtaaaaggttcagatttttatatttatccggaaacggatatggctgccattcgt
cagactatcgaagagatccaaccggattttgtgatcattgattccattcaaacgatgagc
caacccgatgtttcaagtgtggtcggaagtgtgagccaagtacgtgaaagtaccgctgat
ttaatgaaaattgctaaaacaaataatattgctatttttatcgttgggcatgtaaccaaa
gaaggatcgattgccggaccgaaaatgctggaacatatggtagacaccgtgctttatttt
gaaggcgaccgacaccacacgttccgaattttacgggcagtcaaaaaccgttttggttca
accaatgagatcggcatcttcgagatgcgagaaggcggtctagtcgaagtcgtgaaccct
tcagaaatgtttttggaagagcgactagcgggtgcaaccggctctgccgttgtttcagcc
atggaaggtaccaggccgattttggtagagattcagtcactgatcacgccgactgtgttt
ggaaatgctaaacggacggttagcggactagatcataaccgtgtatctttgatcatggct
gtcttagaaaaacgagcagggttattgctgcaaaatcaggatgcttatctaaaagcagca
ggcggtgtaaaattggatgaacctgcaattgatttagccattgccgtcagtattgcttca
agttaccaagaaaaagaaacacggcctaaagactgttttatcggagaattaggtttaaca
ggagaagtccggcgcgtaagccgaattgatcaacgagttcaagaagctgctaaattaggc
tttactcgcttgtttatacccaaaaacaacattggcggctggacgttcccggaaggaatt
gaaatcgtcggtgttacaactatagccgatacgatccgtaaagcattcgcttag
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