Carnobacterium sp. CP1: NY10_1966
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Entry
NY10_1966 CDS
T04230
Name
(GenBank) Transcriptional regulator, RpiR
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carc03000
]
NY10_1966
Transcription factors [BR:
carc03000
]
Prokaryotic type
Helix-turn-helix
Other families
NY10_1966
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
GP57
Motif
Other DBs
NCBI-ProteinID:
ALV22555
UniProt:
A0A0U3PDZ0
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Position
complement(2038132..2038980)
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AA seq
282 aa
AA seq
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MKNQDINLKIKSIYRDLSSKEKKIADFILLHPEEVMHGTISNISDTIQVADATFFRFCKR
LGYKGFQDFKIALASEKVNGALSIHENISKEDNELLMAQKVFESNIKSLNDTKKLLDEQE
LIKAVQFLTAAKTVGFFGVGGSSIIAMDAYHKFLRTPLNCMYTQDTHIQMMQASRLTEND
CAIIISHSGITKDTIQLAEIIKEKKAKAIIITSYSLSPLAKFADALLLSTAEETDYRSEA
LTSRITQLSLIDALFVSVMFKTGDFATHSLEEVRKVISQTKL
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccaagatatcaacttaaaaatcaaatctatctatcgtgatttaagcagcaaa
gaaaaaaagattgcggattttattcttttgcatcccgaagaagtcatgcatggaaccatc
agcaatatctccgatacgattcaagttgctgatgctacttttttccgtttttgtaagcgg
ttaggttataaagggtttcaagatttcaaaattgccttagcttcagaaaaagtaaacggg
gctttatctatccacgaaaatatttctaaagaagataatgaactgctaatggcacaaaaa
gtctttgaatccaatattaaatccttaaatgacacaaaaaagttattggatgaacaagaa
ctgatcaaagctgtccagtttctgactgctgccaaaacggttggtttctttggtgtcggc
ggctctagtattattgccatggatgcctatcataaatttttacgtacgccactaaattgt
atgtatacacaagacactcatatccaaatgatgcaagcctctcggttaactgaaaacgat
tgtgccatcattatttctcattctggcatcaccaaagacactatacaattggcagaaatc
attaaagaaaaaaaagccaaagcaatcattatcactagttactcgctttctcctttagcg
aaattcgcagatgctttgttgttatcgaccgctgaagaaaccgactatcgttctgaggct
ctgacttctcgcatcacacagctaagtttgatagatgctttatttgttagtgttatgttt
aaaacgggtgattttgcgacgcattcacttgaagaagtccggaaagtgatttctcagacg
aaactttga
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