Carnobacterium sp. CP1: NY10_2053
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Entry
NY10_2053 CDS
T04230
Name
(GenBank) Transcriptional regulator, RpiR
KO
K03481
RpiR family transcriptional regulator, glv operon transcriptional regulator
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
carc03000
]
NY10_2053
Transcription factors [BR:
carc03000
]
Prokaryotic type
Helix-turn-helix
Other families
NY10_2053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_6
SIS
MarR_2
HTH_24
DUF1521
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ALV22640
UniProt:
A0A0U3PQP3
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All DBs
Position
2135857..2136618
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AA seq
253 aa
AA seq
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MDLEALINQHYRELNESDLQILSYIIQNKEKCKGMTIIALAQETLTSKSTISRLVKKIGF
SGYSEFKYSLKNETKKELDQTVSNFSDTQKEDITNTLKLFNQTNCEPIIKKIHQAERIFC
YGTGWGQRDVLSDLRRSLIVVEKFPIVLSSKKELEIASKVTFTKGDLLIVVSLSGDIQEV
KNEMNVLTLNGIDILSITSLKNNSLASLATYNLYFQSTPALLNGIEIFSFLPVFILTDSL
IREYIKFYQTGKL
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
gtggatttagaagctttaattaaccagcattatcgtgaattgaatgaaagcgatttacag
atactgtcttacatcattcaaaataaagagaagtgcaaaggaatgaccattattgcctta
gctcaagaaaccttaacctctaaatctaccatttccagactcgtaaaaaaaattgggttc
tctgggtatagcgagtttaaatatagtttgaaaaatgaaacaaaaaaagaattggatcaa
actgtttcaaactttagcgatacacaaaaagaagatatcaccaatacactaaagttgttc
aaccaaacaaattgtgaaccgataatcaaaaagattcaccaggctgaaaggattttttgt
tacggtactggctgggggcaaagagatgttctttcggatttaagaagaagtttgatcgta
gtagaaaaatttcccattgttctttcttcgaaaaaagaattagagatagcttcaaaagta
acatttactaaaggtgatttgctgattgtggtgtctttaagcggagacattcaagaagtg
aaaaatgaaatgaatgttttgactcttaatggtattgatattctatccatcactagtctg
aagaacaatagtttagcttcattagctacctataatttatattttcaaagcacgcctgct
ttattaaatggaatagaaattttttcatttttaccagtttttattttaaccgattccttg
attagagaatacatcaaattttatcaaacgggtaagttataa
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