Carnobacterium sp. CP1: NY10_2300
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Entry
NY10_2300 CDS
T04230
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_2300
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NY10_2300
Archaeal homologous recombinant proteins
NY10_2300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_23
AAA_29
SMC_N
AAA_21
AAA_16
ABC_tran
AAA
Motif
Other DBs
NCBI-ProteinID:
ALV22885
UniProt:
A0A0U3F9W5
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All DBs
Position
2417105..2420158
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AA seq
1017 aa
AA seq
DB search
MRPLKLVMNAFGPYKGKVEIDFTQFNQKTLFLVSGPTGAGKTTIFDAIAYALYDDASGTS
RGKDTFKSQFASDEVLCYVELEFELAGKKYYIKRTPAQMGPGKHRIKKYSPEVELIHGTN
VTTKINEANKEIQDLLSLSYEQFKQIVMLPQGEFKKMLESNSADKEKIFRNIFQTDTIKT
FQLDLKEEARRLKSEVEQSDKMMEQFVGMIQPQENESLAEAIQLLDIKYLLTELEMALDT
YRDKMQQYTSEMDQLRKKMHDNQERVEWLTELAQLEQTKNELEALKTAVNQKRTTLALNE
KAQKLADLKEQQQQEATDKTAIYQHLEADKQALRETRQALKENKKDFAAVEKKYVLLPEK
REAVNQLEQEERTIKTIKTKENQIKGFEEDNQHHETDIEKQAATLIDYKKQVEQIKNLLT
ESYQARTDLLEKQKSANELQEKNNALSSKQKSVTVLAQTVEQKETKLALFKETEAAYQAI
EEDYKQQRLAYNRNIAGMLADELEADSACPVCGSMEHPHTAVLTEDIVSQEQLEAFEEEK
NQNYQAYNSASNEVRHLNERIQEYEQLLELHASEAGGALNQLQEELTALADERTKLAIDI
EQLEQLAGQEKDLQHQLEEIQQAERRLESVIQELSSVCQNNCKRIQETKEEIQELRLQLT
YEELEQVQATKRQLIDELQQIEAAYKKHQDKKIALEKSETQYQTSTLSLEAQHERLVVRY
EEATAEFEKQLKAANLNEAFEEHLIDAEQAKTLTEEVAAYDQKVWVNRVNYQKQKEKLAA
SDSRTIEDYQLENQEKQKELANLAERYQELVGTVKNYETASGEISKNYEAKQAQLENYRL
YSELAELANGSKETDYVSFERYVLAIYFEEIILAANLRFTQMTNNRYSLLRREEKVKGTG
AKGLDLDVFDNYTGKTRSVRTLSGGESFKASLALALGLSDVIQNHSGGVSVDTLFIDEGF
GTLDSDSLDSAIETLFELNQRGRLVGIISHVEELKMRIPVHIDVTKTSQGSQVKVKM
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagacccttaaaattagttatgaacgcttttggtccttataaaggtaaggtagaaatt
gatttcacccaatttaaccaaaaaacgctttttttagtaagcggaccaacgggtgctggg
aaaacaacgatttttgatgccattgcctatgctttatatgatgatgccagtggaacaagc
cgcggaaaagatacgttcaaatcccaatttgcatcggatgaagtcctctgttatgtcgaa
ttggaattcgaactagcgggcaaaaagtattacatcaaacgtacgcctgctcaaatgggg
cctgggaaacacagaattaaaaaatacagtccggaagttgaattgattcatggcactaat
gtaaccactaaaataaatgaagcgaacaaagaaattcaagatttgctgtcgctctcttat
gagcaatttaaacaaatcgtgatgctgccgcaaggcgaattcaaaaaaatgctggaatcc
aatagtgcagataaagaaaaaatctttcgtaatatttttcaaacggataccatcaaaacg
tttcaattggatttaaaagaagaagctcgtcgcttaaagtcagaagtcgaacaaagcgat
aaaatgatggaacaatttgtgggcatgatccaaccccaagaaaacgagtcattggctgaa
gcgatccagttattggacatcaaatacctattaacagaattagaaatggcattggatact
tatcgagataaaatgcaacaatatacgtctgaaatggatcaattgcgtaaaaaaatgcat
gacaatcaagagagagtggaatggttaacagaactggctcagttagaacaaacaaaaaat
gagttggaagctttaaaaacagctgtgaatcaaaaacgaacaaccttagcattgaatgaa
aaagcgcaaaagctggctgatttaaaagaacaacaacagcaagaagcgacggataagaca
gcaatataccagcatttagaggcggataaacaagcgttaagagaaacacgacaggcgctt
aaagaaaataaaaaagattttgcagcggttgaaaaaaagtatgttcttttacctgaaaaa
agagaagccgtcaatcaattggaacaggaagaacgaaccataaaaacaattaaaacaaaa
gaaaaccagataaagggttttgaagaagacaatcagcatcatgaaactgatattgaaaaa
caagcagcaacattaattgattataaaaaacaagtagaacagataaagaatctgttaaca
gaaagctaccaagctagaacggatttattggaaaaacaaaaaagcgcaaatgaattgcag
gaaaaaaataatgcattgtcatccaagcaaaagagtgtaacggtgttagctcaaacagta
gaacaaaaagaaacgaagttggccttgtttaaagaaacggaagctgcttaccaagcgatt
gaagaagactacaagcagcaacgtttggcctacaatcgaaatatcgcaggaatgctggct
gatgagttagaagcagattctgcttgtccagtttgcggttcaatggaacatcctcataca
gcggttttgacggaagatatagtctcccaagaacaattagaggcatttgaagaagaaaaa
aaccagaattatcaagcttacaactctgcttccaatgaagtccgccatttaaacgagcgt
atccaagagtatgaacaattattggaattgcatgctagtgaagcagggggagcattgaac
cagctgcaagaagaattaacagcattagctgacgaaagaacgaaacttgccattgatatc
gagcaactagaacaattagcggggcaggaaaaggatcttcaacatcaactagaagaaatt
caacaagccgaacgccgattggagtctgttatccaagaattgagctcagtttgtcaaaat
aactgcaaaagaatccaggaaacaaaagaagaaattcaggaattacggcttcaactgaca
tatgaagagctcgaacaagtacaagcaactaaacggcagttgatcgatgaattgcagcaa
atcgaagcagcttataaaaaacaccaagataaaaaaatcgcattagaaaaatcagaaacg
cagtaccagaccagtacactttctttagaagctcaacacgaacgactggttgttcgatat
gaagaagcaacggctgaatttgaaaagcagttaaaagcagctaatttaaatgaggctttt
gaagagcatttgattgatgctgaacaagcaaagactttaacagaagaagttgctgcttat
gatcaaaaagtctgggtcaaccgtgtaaactatcaaaagcagaaagaaaaattagcagca
agcgatagtcgaaccattgaagactatcagttagaaaaccaagaaaaacaaaaagaactg
gcaaatttggcagaaagatatcaagaattagtcggaactgtaaaaaattatgaaacggcc
agtggagaaatcagcaaaaattatgaggctaaacaagcacaattagaaaattatcgtctg
tacagtgaattagccgaattagccaatggttcgaaagagacagactacgtatcatttgaa
cgatatgtattggcgatttattttgaagaaatcattcttgctgcaaatttgcgcttcaca
caaatgacgaacaatcgatattctttactgagacgtgaggaaaaagtcaaaggaacaggc
gcaaaaggattggatttggatgtttttgataattatacaggaaaaacaagaagtgtccgg
actctatctggcggtgaaagttttaaagcatctttagcactagctttgggattaagtgat
gtcattcaaaatcatagcggcggagtcagtgttgatactttgtttattgatgaaggcttt
gggacattagattctgattccttagatagcgcgatcgaaacgttgtttgaattaaaccaa
agaggcagactggtcggcattatttctcatgttgaagagttgaagatgcgtataccggtt
catatcgatgtaaccaaaacttcgcaaggaagccaagtcaaagtgaaaatgtaa
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