Carnobacterium sp. CP1: NY10_2396
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Entry
NY10_2396 CDS
T04230
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
carc
Carnobacterium sp. CP1
Pathway
carc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NY10_2396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_2396
Enzymes [BR:
carc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NY10_2396
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NY10_2396
RecFOR pathway proteins
NY10_2396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_14
nSTAND3
NB-ARC
AAA_16
AAA_3
RNA_helicase
Sigma54_activat
AAA_25
AAA_24
NTPase_1
MCM
TsaE
AAA_33
Sigma54_activ_2
Bac_DnaA
IstB_IS21
AAA_18
DUF815
AAA_17
Rad17
AAA_19
NACHT
Parvo_NS1
AAA_11
HTH_41
ABC_tran
Dcc1
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
ALV22980
UniProt:
A0A0U3P7D0
LinkDB
All DBs
Position
2522038..2523045
Genome browser
AA seq
335 aa
AA seq
DB search
MTYEDRIISGESDSMDELSIEKSLRPQYLNQYIGQAKLKLELGIYIEAAKSREEALDHVL
LYGPPGLGKTTMAMVIANEMAVNIRTTSGPAIEKAGDLVALLNELEAGDVLFIDEIHRMP
RMVEEMLYSAMEDYFVDIIVGQGPTAHPVHFPLPPFTLIGATTRAGMLSAPLRDRFGIVS
HMEYYTIEDLSDIVIRSADIFQTEIHDSGALEIAKRSRGTPRVANRLLKRVRDYAQVQSD
GIVNQKVADAALSMLRVDQKGLDYVDQKMVRTMIEVYGGGPVGLSTIAANIGEEMETIED
MVEPYLLQMGFIQRTPRGRIVTQLGFDHLGYPINN
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
gtgacttatgaagaccggattatttctggagaaagcgatagtatggacgagctatcgatt
gaaaaatccttacggccacagtacttaaaccaatacattggacaagcaaaattaaaatta
gaactaggcatttatatcgaagcagctaaaagccgtgaagaagctttagaccatgtttta
ttatatggtcctccaggattagggaaaacgaccatggcaatggttattgctaatgaaatg
gctgttaacatacgaaccactagtgggccagctatcgaaaaagctggtgatttagtagcc
cttttgaatgaattagaagcaggcgatgtgttgtttatcgatgagattcaccggatgccg
agaatggtagaagaaatgctctattctgcaatggaagattatttcgttgacatcattgtt
gggcaaggaccgacggctcatcccgttcattttccgttgccgccctttactttgattggt
gcgaccacacgtgctgggatgctatcagcgcctcttcgcgatcgttttggaatcgtctcg
catatggaatattatacgatcgaagatttaagcgatatcgtcatccgctcagcggatatc
tttcaaactgagattcatgatagcggagcgttggaaattgccaaacgttctagaggaaca
ccacgggttgccaatcggcttttgaagcgtgtacgggattatgcgcaagtccaatctgac
ggcatcgttaatcaaaaagtagctgatgcagctttatcaatgctgcgtgtggaccaaaaa
ggactggattatgtcgatcaaaagatggttcggacaatgatcgaagtctatggcggcggg
ccagtaggactgtctactatagcagcaaatattggggaagaaatggaaacgatcgaagat
atggtcgagccgtatttattgcaaatgggctttattcagcgtactccacgtggtagaatt
gtaacgcagttaggttttgaccatcttggttaccctataaacaactaa
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