Carnobacterium sp. CP1: NY10_2431
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Entry
NY10_2431 CDS
T04230
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
carc
Carnobacterium sp. CP1
Pathway
carc03030
DNA replication
carc03410
Base excision repair
carc03420
Nucleotide excision repair
carc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NY10_2431
03410 Base excision repair
NY10_2431
03420 Nucleotide excision repair
NY10_2431
03440 Homologous recombination
NY10_2431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carc03032
]
NY10_2431
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_2431
Enzymes [BR:
carc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NY10_2431
DNA replication proteins [BR:
carc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NY10_2431
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NY10_2431
NER (nucleotide excision repair)
GGR (global genome repair) factors
NY10_2431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ALV23015
LinkDB
All DBs
Position
2561706..2564366
Genome browser
AA seq
886 aa
AA seq
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MTQKNKLLLIDGNSVAFRAFFALHQQLERFKNKSGLHTNALYGFHSMIENVLTKEKPTHV
LVAFDAGKTTFRNAFFEEYKGGRSKTPSEFSEQMPYLRELLNGFGIKHYELDNYEADDII
GTLSAQANPAEFDVVVVSGDRDLTQLAKENVRVDITVKGVSELKEYTVESIQAEMGISPM
QIIDMKGLAGDASDNIPGVTKIGEKTALKLLKEYGSVENIYNHVNEMKKSKMKENLINEK
ETAFLSKRLATIDQDSPITIKIEDLAYTGPNTEKLIDFYKEMDFKTHLSRLDTTEHDAEN
EANREAIVYETVTEISPEMFSDKMALYVEMLTDNYHTADIVSISWGNVDHIYVGEPELVL
NSKDFQDWAKNPKFSKQVFDAKRTFVVLKRYGIDVENIQFDILLASYILNTKDNSKDLSE
VATEHHYFEVASDESVYGKGAKIHLPEDPAVMQDHLARKVKAILVLSAQLEQHLAENNQS
ELFYDMELPLAMVLAEMEITGIKVDAQRLREMKVEFAERLLAIEKRVYEQAGEEFNLNSP
KQLGVILFEKMGYPVIKKTKTGYSTAVDVLEQLRDQAPIVADILEYRQIAKLQSTYIEGL
LKVIHGHNGKIHTRYMQTIAQTGRLSSIDPNLQNIPIRLEEGRKIRQAFVPSHKGWKIFA
SDYSQIELRVLAHISDDEHLKAAFIEGQDIHASTAMRVFGIEKQEDVSSEMRRRAKAVNF
GIVYGISDYGLSKNLEISRKEAQNFIDTYFIKYPGVKTYMEEIVREAKDKEYVETLFHRR
RYLPDINSRNFNLRSFAERTAMNTPIQGSAADIIKVAMIEMDKRLKEEKLEATMLLQVHD
ELIFEAPEAEIPILEKLVAEVMENAVDLNVPLKVESDSGDNWYEAK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgactcaaaaaaataaattattattaatcgatgggaatagtgttgcattccgagctttt
tttgctttgcaccagcagcttgaacggtttaaaaataaaagtggtttacacacgaatgct
ctttatgggtttcatagtatgatcgaaaatgtcttgactaaagaaaagcctactcatgtt
ttagttgctttcgatgccggaaaaacgacgtttagaaatgctttttttgaagagtataaa
ggcggaagatcaaaaacaccgagtgaattttcggaacaaatgccttatttgcgcgagttg
ttaaatggcttcggtatcaagcattatgaattagacaattatgaagcggacgatattata
ggaaccttgtcagcacaagcaaatcctgctgaatttgatgtggtcgtcgtttcgggcgac
cgagatctcacacaactagctaaagaaaatgtacgggtggatatcactgtcaaaggcgtt
agcgaactgaaagaatacaccgttgagtctattcaagcagagatgggaatttccccgatg
caaattattgacatgaagggtctcgctggggacgcttcggataatataccaggggtaact
aaaatcggtgaaaaaacagcgttaaaattattaaaagaatacggctcagttgaaaatatt
tacaatcacgttaacgagatgaagaaaagcaaaatgaaagaaaatttgatcaatgaaaaa
gaaacggcgttcttaagcaaacgcttagccaccattgatcaagattcgcctatcaccatt
aagatagaagatctagcttataccggaccaaatacggaaaaattgattgatttttataaa
gaaatggatttcaaaacacatttaagccgattagatacaacagaacatgatgctgaaaac
gaagctaaccgcgaagcaatcgtctatgaaactgtaacggaaatttcaccagagatgttc
agcgataaaatggctctctatgttgaaatgctgaccgacaattaccatacagcggatatc
gttagtatcagttggggaaatgttgatcatatctatgttggggaaccggaattggtctta
aattcaaaagattttcaagattgggctaaaaatccgaagtttagcaaacaagttttcgat
gctaaacgtacttttgtggtattgaaacggtatggtatcgatgttgaaaatatacaattc
gatattttgctggcttcttatatattgaatactaaagacaatagcaaagatttatcagaa
gtagcaacagaacatcattactttgaagtagcttcggacgaaagtgtctatggtaaaggg
gctaaaattcatctgccggaagatccggcggtgatgcaagatcatttagcgcggaaagtc
aaagcaattttagttttaagtgctcaacttgaacagcatttagctgaaaacaaccaaagc
gaattgttttacgatatggaattaccgttggcgatggttttagcagagatggaaatcaca
ggaataaaggtggatgctcaacgattgcgagaaatgaaagttgagtttgcagagcgtttg
ttagctattgaaaagcgagtttacgagcaagcgggagaagaatttaatttgaattcgcct
aagcagctaggcgtcatcttgtttgaaaaaatgggttatccagttatcaaaaaaactaaa
acagggtattcaacagctgtagacgttcttgaacaactacgagaccaagcacccatcgtg
gcagatattttagaataccgtcaaatcgctaaacttcagtcaacgtatattgaaggttta
ttaaaagtcatccatggacacaatggtaagatccatacacggtacatgcaaactattgca
caaacagggcgtttaagttctattgatccaaatctgcaaaatatacctattcgtttagaa
gaaggacgaaagatcagacaagcttttgttcccagccataaagggtggaaaatatttgct
tctgactattcgcaaattgaattacgcgttctggcgcatatttctgatgacgaacattta
aaagctgcctttattgaaggtcaagatatccatgccagtacagccatgcgtgtttttgga
attgaaaagcaagaagatgtgtcttctgagatgcgccgtcgtgctaaagcagttaacttt
ggcattgtatacggcattagtgattatggtttatcaaaaaatttagaaatcagccgtaaa
gaagctcagaactttatagatacgtattttattaaatacccaggggttaaaacctatatg
gaagaaatcgttcgtgaagccaaagataaagagtacgttgaaacacttttccatcgacgt
cgttatttaccagatatcaattcacgtaattttaatttacgttcatttgctgaacgcaca
gcaatgaacactccaattcaaggcagtgctgcagatatcattaaagtggcaatgattgaa
atggataagcggttgaaagaagaaaaattagaagcaacaatgttattgcaagtacacgat
gagctgatttttgaagcgcctgaagctgaaattccaatccttgagaaattggttgctgaa
gtgatggaaaatgcagtagatttgaatgtaccgttaaaggtagaaagcgacagcggcgac
aattggtacgaagcgaaataa
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