Carnobacterium sp. CP1: NY10_336
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Entry
NY10_336 CDS
T04230
Name
(GenBank) Chromosome partition protein smc
KO
K03529
chromosome segregation protein
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
carc03036
]
NY10_336
Chromosome and associated proteins [BR:
carc03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
NY10_336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALV20956
UniProt:
A0A0U3NN19
LinkDB
All DBs
Position
295563..299138
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AA seq
1191 aa
AA seq
DB search
MQLKRIEIAGFKSFAEKTTIEFHEGVTAVVGPNGSGKSNITEAIRWVLGEQSAKSLRGGK
MNDIIFAGSETRKPLNVAEVTLVLENEDHFLPLDFSEINITRRLHRNGDSEFYLNKQACR
LKDIVDLFMDSGLGKESFSIISQGKVEAIFNSKPEDRRAIFEEAAGVFKYKTRKKKAEQK
LVETEDNLNRVQDIVYELDGQIEPLQMQSSIAKDYLMQKEQLSDVEIALTAVEIEQLKDQ
WTTHKSKLTAFYEQLSKKKTTYAELEKKSKKMKLQKQQLTEILDSEQQQLVKTIQQYEQL
EGQKQVLNERSKHTQENRDHYEMSKQQALIKIEKLEEQLQQLKILLDKKINQQKELRTEL
ETAEKERMMFSANSKETIEQLRNQYVDLMQQKTSLRNEQSYLEKTYNQVAQKTLKSKALT
ATLEAEFQQVSKQLESSTGDVAQIQQEIAQKLLHYQEQQITIQEKRTALEQKEQMMYDAL
RVVQQAKAKKESLQELRDDYAGFYQGVKEVLKQRVQIGGIIGAVAELIVVPKTFEMAIDI
ALGAASQNVIVKDELSGRKAIQYLKQKRSGRATFLPLTTIKPRQLPVAVENQAKQHEGFM
GIASEMVQYPAEISHIIQNILGTTILAKDLQTANDLAKTLQFKYRVVTLEGDVINAGGSM
TGGASKKGNQGSLFSRKNELELLTKQISQMEKTLTDKEIEVRGFKQVLKQAQQNLEDLRE
TGEQQRLKEQELKNQAEINEEKLSRLQRELKAYQFESEEAKAETEQYEQRTAAITLELAA
IQTEMEQINHQIELASSQNEERAALQAEASEKVQRLMTQLATIKEQVANLEKEQLALKSQ
LEIENQELNKLQLAIQQMSQTDGSHQLSQKEIMETLSKLKKQKDNLDHSLAVHQNQRTEL
ETDLEQLEQEMSLKQNQQQYVMEQITKAEVALNRDEVAIESRLTYLNEEYHLSFEAAKSE
HTLVISMEEAAHKVKLLKQSIEELGNVNVGAIEEFERVNERYLFLVEQRDDLLEAKSSLY
ETMDEMDEEVKRRFSESFEAIRARFSVVFPQMFGGGTAELQLTDPINLLTTGIEIVAQPP
GKKLQQLSLLSGGERAFTAIALLFSIIQVRPVPFCILDEVEAALDEANVVRFGRYLRRFE
GDTQFIVITHRKGTMEEANVLYGVTMQESGVSKIVSVRLEEAETKERLPLG
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
gtgcagttaaaaagaatcgaaatcgctggtttcaagtcgtttgctgaaaaaacaacgatt
gaatttcacgaaggggtcacagcagttgtgggaccaaacggcagcggaaaaagcaacatt
actgaagctattcgttgggttttaggggaacagtcagctaaaagcttgcgaggcgggaag
atgaatgacatcatttttgctggttcggaaactagaaaaccattgaatgtggctgaagtg
acattagtactagagaatgaagatcatttcttacccttggattttagtgaaatcaatatc
acgagacgattgcatcgaaatggcgatagtgaattttatctgaataaacaggcttgccgt
ttgaaagatattgttgatttatttatggattcagggttgggcaaagagtcgttttcaatc
atatcgcaaggcaaagtagaagccattttcaacagcaaaccagaagaccgcagagcaatt
tttgaagaagcagctggagtttttaaatataaaacgcgtaagaaaaaagctgaacagaaa
ttagtggagacggaagataacttgaatcgggttcaagatattgtttatgaattggatggg
caaatcgaaccgctgcaaatgcaaagcagtatagcaaaagattacttgatgcaaaaagaa
cagttaagtgatgtagaaatcgcattaacagccgttgaaattgaacaattaaaagaccaa
tggactactcataaatctaaattaacagcattttatgagcagttatctaaaaagaaaaca
acttatgctgaattagaaaaaaaatcaaaaaaaatgaagcttcaaaaacagcaattaaca
gagatccttgatagtgagcagcagcaattagtaaaaaccattcaacaatacgaacaatta
gaaggacaaaaacaagttctaaatgaacgctcaaaacatacgcaagaaaaccgggatcat
tatgaaatgtctaaacaacaggcgttaatcaaaattgaaaaattagaagaacagttgcag
caactaaaaattttgctggataaaaaaatcaatcagcaaaaagagttgagaaccgaactg
gaaacagcagaaaaagaacggatgatgttttctgctaacagtaaagaaacgattgaacag
ctgcgtaatcaatatgttgatttgatgcagcaaaaaacaagtttaagaaatgaacaaagt
tatttggaaaagacgtacaaccaagtagctcaaaagacgttgaaatctaaagcgttgaca
gctacattggaagctgagtttcagcaagtgtctaagcaattggaatcctcaacaggagat
gtagcacaaattcaacaagaaattgcgcagaaattgttgcattatcaagaacaacaaatc
actatccaagaaaaacggacagccttagaacaaaaagaacaaatgatgtacgatgctttg
cgagtcgttcagcaagctaaagctaaaaaggaaagtttgcaagaattaagggatgactat
gcgggattctatcaaggtgttaaagaagtattgaaacaaagggtacagatcggcggtatc
atcggtgctgtagctgaattgatcgtagttccaaaaacatttgaaatggcaatcgatatt
gctttgggtgcggcttctcaaaacgttattgtgaaagatgaactaagcggacgtaaagcg
attcaatatttaaaacagaaacgttcaggccgagcaacttttttgccgttaaccaccatt
aaaccacgtcaattgccggttgcagttgaaaatcaggcaaaacagcacgaagggtttatg
gggatcgccagcgaaatggttcaatatccagcagagatttctcatatcattcaaaatata
ttaggcaccaccattttggcaaaagatttgcaaacagctaatgatcttgctaagactctt
caatttaaatatcgtgtggtaacgctcgaaggagatgttatcaatgcaggaggatcaatg
actggcggagcaagcaaaaaaggcaatcaaggcagtctcttttcgcgtaaaaatgaatta
gaattattaacaaaacaaatcagtcaaatggaaaaaacgttaaccgataaagaaattgaa
gtgcgcggttttaaacaagtgcttaaacaagcacaacaaaatctagaagatctcagagaa
accggagaacaacaacgtctaaaagaacaagagcttaaaaaccaagctgaaataaacgaa
gaaaaattatcccgtttacaaagagaattaaaagcatatcaatttgaatcagaggaagct
aaagcagaaacagaacaatacgaacaacgaacagctgcgataactcttgagctagcagcg
attcaaacggaaatggaacaaatcaatcatcaaattgagctagcttcctcacaaaatgaa
gaaagagcagccttacaggctgaggccagtgagaaagtgcaacggctgatgacccagtta
gcaaccattaaagaacaagttgctaacttggaaaaagagcagcttgcactcaaaagccaa
ttagagattgaaaatcaagaattaaataaattgcagttagcgattcaacaaatgtctcaa
acagatggaagccatcagttgtctcaaaaagagataatggaaacattatcgaaattaaaa
aaacaaaaagacaatttagaccattcgttagccgtccatcaaaatcagcgcacggaattg
gaaactgatttggaacaattagaacaagaaatgagtctcaaacagaatcaacagcaatac
gttatggagcagatcaccaaggcggaagtggctttaaatcgagatgaggtggctattgaa
agccgattgacttatttgaatgaagagtaccacttgagctttgaagcagcaaaatcagaa
catacgcttgtgatatccatggaagaagcagcccataaagtaaaattattaaaacaaagt
atcgaagaactaggcaatgtcaatgtgggagcgattgaagagtttgaacgtgtaaatgaa
cggtatttatttttagtcgaacaaagagatgacttgcttgaagctaaaagtagtctatat
gaaacaatggatgaaatggatgaagaggttaaacggcgtttttccgaatcttttgaagcg
attcgtgcgcgatttagtgtggttttcccgcaaatgtttgggggaggaactgctgagctg
cagttgacggatccaataaatttgttgacgactggaattgaaatcgtcgcacagcctcct
ggaaaaaaattacaacagttaagtttactgtctgggggagaacgagcatttacagctatt
gctttactattttcgattattcaagtcaggcccgtaccattttgtattttggatgaggtt
gaagcggcacttgatgaagcgaatgtcgttcggtttggacggtatttgagaagatttgaa
ggcgatacacagtttattgtaattactcaccgtaaaggaacgatggaagaagccaatgtt
ttatatggcgtaacgatgcaggagtctggtgtttctaaaattgtgtcggtacgtttggaa
gaagctgaaacaaaagaacgtttgcctttagggtag
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