Carnobacterium sp. CP1: NY10_539
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Entry
NY10_539 CDS
T04230
Name
(GenBank) Transcription termination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
carc03021
]
NY10_539
03009 Ribosome biogenesis [BR:
carc03009
]
NY10_539
Transcription machinery [BR:
carc03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
NY10_539
Ribosome biogenesis [BR:
carc03009
]
Prokaryotic type
rRNA transcription factors
NY10_539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
KH_NusA_C
KH_2
KH_1
SHOCT-like_DUF2089-C
Motif
Other DBs
NCBI-ProteinID:
ALV21157
UniProt:
A0A0U3F4Z3
LinkDB
All DBs
Position
487123..488400
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AA seq
425 aa
AA seq
DB search
MGKEMLNALDTLEQEKGIAKEIVIDALEAALVSAYKRNYGQAQNVEVEFDMKKGNMHVYS
VKEVVDVVFDSRLEVSMEEALDINKAYELGDTIRFEVTPKDFGRIAAQTAKQVIMQRVRE
AERNIIYNEFITYENDIMQGIVERQDHRYIYVNLGKIEAVLSKQEQIPNEVYKPHDRIKV
YVTKVENTSKGPQIFVSRSHPDLLKRLFEQEVPEIYDGIVEIKSVAREAGDRAKIAVMSR
DENIDPVGTCVGPKGQRVQAIVSELKGENMDIVEWSADPATFIANALNPAQVVNVTFNEK
EGSCVVVVPDYQLSLAIGKRGQNARLAAKLTGFKIDIKSESDMEASLEALEETGLERTED
YAESLEETMSAEEAIDVENVIESIEDQEDLESDLRIDDDVEEGNLDSEEAEEMIELAEDE
NHVEE
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaagaaatgttgaatgctcttgacaccttagaacaagaaaaagggattgcaaaa
gaaatcgtaatcgatgcattagaagctgcgttagtttcagcatataaacgaaattatggt
caagcccaaaacgttgaagtcgaatttgatatgaaaaaagggaacatgcatgtttattca
gtcaaagaagtggtagacgtggtatttgattctcgtttagaagtcagcatggaagaagct
ttggatattaataaggcttacgaattaggcgatacgattcgtttcgaagtaactcctaaa
gactttggtagaatcgctgcacaaacagcaaaacaagttattatgcaacgcgttcgtgaa
gctgaacgaaacatcatttacaatgagtttatcacatacgaaaatgacattatgcaaggg
attgttgaacgccaagaccatcgctatatttatgtaaatttaggtaaaatagaagcagtc
ttatcgaaacaagaacaaataccaaatgaagtatacaaaccgcatgatcgaatcaaagtg
tatgtcacgaaagttgaaaatacatctaaaggcccgcaaatttttgtaagccgaagccac
cctgatttattgaaacgtttgtttgaacaagaagttccagaaatttatgatggaatcgtt
gaaatcaaatccgttgcacgtgaagctggtgaccgagctaaaatagctgtgatgtcaaga
gatgagaatattgatccagttggaacgtgtgttggaccgaaagggcaacgtgtgcaagca
atcgtaagtgagttaaaaggtgaaaacatggatattgttgaatggagcgccgatccagca
acttttatcgcgaatgctttgaaccctgctcaagttgtgaacgtgacattcaatgaaaaa
gaaggcagctgtgtagtagtagttcctgattaccaactctctttagcaattggtaaacgt
ggacaaaatgctcgtttggctgcaaaattaacaggatttaaaatcgatatcaaatcagaa
tctgatatggaagcttcgcttgaagctttagaagaaactgggctagaacgtacagaagat
tatgcagagagtcttgaagaaacaatgagtgctgaagaagcaatcgatgttgaaaatgtt
atcgaatcaattgaagatcaagaagatttagaatctgaccttagaattgatgatgatgta
gaagaaggcaacttagattcggaagaagccgaagaaatgattgaactagcagaagatgaa
aatcatgtcgaagaataa
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