Carnobacterium sp. CP1: NY10_546
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Entry
NY10_546 CDS
T04230
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
carc03016
]
NY10_546
Enzymes [BR:
carc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NY10_546
Transfer RNA biogenesis [BR:
carc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NY10_546
Prokaryotic type
NY10_546
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ALV21164
LinkDB
All DBs
Position
493627..494544
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AA seq
305 aa
AA seq
DB search
MEGILPLWKERGMTSHDCVFKLRKILKTKKIGHTGTLDPDVDGVLPICIGNATKVVEYMM
ETGKGYIGEITLGFSTTTEDSSGDIVERVQVDEMPLTTAIDQAMAAMEGSITQIPPMFSA
VKVNGKRLYEYARAGETVDRPSRKATINRFVRTTEPVLNEIEHTVSWRFEVDCGKGTYVR
TLAVDLGLALGYPAHMSDLTRVLSGTFKASDCLTLNQVAEKMDDQTIQQALFPLEYGLKE
LASVNIDQPLWDKVKNGAVLPLDAFGEQIDFPVAVMYQNQAWSIYDKHPTKENLLKPVKG
LRTFQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcattctcccattatggaaagaacgtggcatgacgagtcacgattgcgtattt
aaacttcgaaaaatattaaaaacaaaaaaaatcggtcataccggaaccttagacccagat
gtagacggtgtcttacccatctgtatcggaaatgctacaaaagttgtggaatacatgatg
gagactggtaagggctacatcggtgaaattactttagggttttcaacgacaactgaagac
agcagcggcgatattgtagaacgtgttcaggtggatgaaatgcctttgacaacagcgatt
gatcaagcaatggccgccatggaaggttctattactcaaattccacctatgttttctgca
gttaaagtgaacgggaaacggttgtatgaatatgcacgggctggtgaaaccgttgatcga
ccaagcagaaaagccacaatcaaccgttttgttcgaaccactgaacctgtattaaacgaa
atagagcatacagtttcttggcgatttgaggtggattgcgggaaagggacttatgttcgc
accttagccgtcgacttgggcttggctctcggttacccagcacatatgtctgatttaacc
cgtgtcttaagcggcacttttaaagccagcgattgtttgacgttaaatcaagttgctgaa
aaaatggatgatcaaaccattcaacaagccttatttccattagagtatggactgaaagaa
cttgcttcggtcaacatcgatcaacccttgtgggataaagttaaaaatggagctgtgctg
cctttagatgcttttggagaacaaatcgattttccagtggctgttatgtaccaaaatcaa
gcatggagcatttatgataaacacccaactaaggaaaatcttttaaaaccggtcaaaggt
ttacgtacatttcaatag
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