Carnobacterium sp. CP1: NY10_646
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Entry
NY10_646 CDS
T04230
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
carc
Carnobacterium sp. CP1
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
carc03032
]
NY10_646
03400 DNA repair and recombination proteins [BR:
carc03400
]
NY10_646
Enzymes [BR:
carc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NY10_646
DNA replication proteins [BR:
carc03032
]
Prokaryotic type
DNA Topoisomerases
NY10_646
DNA repair and recombination proteins [BR:
carc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NY10_646
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
PI_PP_I
DUF2996
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALV21264
UniProt:
A0A0U3PLS3
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All DBs
Position
complement(608415..610490)
Genome browser
AA seq
691 aa
AA seq
DB search
MAYKYLVIVESPAKAKTIEKYLGKNYKVVASLGHIRDLPKSRMAIDVENNYEPEYISIRG
KGPLIKELKGYAKKAEKVFLAADPDREGEAIAWHLSFLLGLDSEAKNRVVFNEITKEAVK
GAFKEPRSIDMELVNSQQARRILDRLVGYTISPILWKKVKKGLSAGRVQSIALKLICERE
TEINEFKPEEYWSIAGNFKKGTKKFKANFYGLNGKKMNLGNAEDVQKVIQEIKGNDFDVT
KVTKKERKRNPALPFKTSTLQQEAARKLNFRTQKTMMIAQQLYEGISLGRGGAVGLITYM
RTDSTRIAESAKNEVAEYITKEFGPEYSASKPRIAKKSASSQDAHEAIRPSSVMRTPKEI
EKHLTKDQYKLYNLIWSRLVASQMTPAVFDTVKVDIVQNAILFRANGSTLKFPGYQKVYV
EGTDDGKEEKENILPEMEKGDRVQSVDIEPKQHFTQPPARFSEATLIRTLEENGVGRPST
YAPTLNTIQKRYYVKLQSKRFEPTELGMIVNNLVVEFFPQIVDTHFTAEMEKDLDAVEEG
KEKWVNVIDRFYQPFIKEVETAEETIEKIQIKDEPAGFDCELCGHPMVIKLGRYGKFYAC
SNFPECRNTKAIVKEIGVTCPTCKEGQVIERKSKKNRLFYGCDRYPACEFVSWDKPIGRN
CPKCDHYLVEKKTKGKKQVICSHCEYKEEVQ
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
ttggcctataaatacctggtgattgtagaatcgcctgcgaaagcaaaaacaattgaaaaa
tatttaggaaaaaactacaaagttgttgctagtctaggtcatattcgtgacttgccaaaa
agccgcatggcaattgatgtagaaaataactatgaacccgaatacatttccatacgtgga
aaagggcctctaataaaagaactaaaaggttacgctaaaaaggctgaaaaagttttcctc
gcagctgacccggatagagaaggagaagctatcgcatggcaccttagctttcttctggga
ttagacagtgaagctaaaaatcgagtcgtttttaatgaaattacaaaagaagccgtcaaa
ggtgcatttaaagaaccccgttccatcgatatggaattggtaaactcacagcaggctcgc
cgaattttagaccgtttagtaggctatacgattagccctattttatggaagaaagtcaaa
aaaggtcttagtgctggacgagttcaatcgattgccttaaaacttatttgtgaacgtgaa
acagagatcaatgagtttaaaccagaagaatactggagcattgctgggaattttaaaaaa
gggaccaaaaaattcaaagccaatttttatggtttaaacggcaaaaaaatgaatttaggc
aatgctgaggatgttcaaaaagtgattcaagaaatcaaaggcaatgattttgacgttacc
aaagtaactaaaaaagaacgcaaacgtaatcccgctttgccttttaaaacaagtactcta
caacaagaagctgcacgaaaattaaatttcagaacacaaaaaaccatgatgatcgctcag
cagctttatgaagggatctcattggggcgtggcggagccgttggtttgattacctatatg
cggacagattctacacggatcgctgaatctgctaagaacgaagttgcggaatacatcact
aaagagtttggaccagagtattctgcttcaaaaccccgtatagctaaaaagtcggctagt
tctcaagatgcccatgaagctatccgaccatcaagcgtgatgcggacacctaaagaaatc
gaaaagcatttgacaaaggatcaatataaactctacaatcttatctggtcacggttagtt
gctagtcaaatgacccctgcagtttttgatacagtaaaagttgatattgttcaaaatgcc
attctgtttagagcaaatggttcaacacttaagttccctggttatcaaaaagtttatgtg
gaaggaaccgatgacgggaaagaagaaaaagaaaacatcttacccgagatggaaaaaggc
gaccgtgttcaatcggttgacattgaaccgaaacagcactttactcaaccgccagctcgc
ttttctgaagcaacattgatccggacactggaagaaaatggagttggtcgtccttctacc
tatgctccaacacttaataccatccaaaaaagatattatgtgaagttgcaaagtaagcgg
tttgaaccaaccgagttgggtatgatcgtcaataatttagtcgttgaatttttcccgcaa
atcgttgatactcattttacagcagaaatggaaaaagacttagatgctgtcgaagagggt
aaagaaaaatgggtgaatgttatcgatcgtttctatcaaccgtttattaaagaagttgaa
acagctgaagaaaccattgaaaaaatccaaatcaaagatgaacctgctggtttcgattgt
gagttatgtggccatccaatggtcatcaaactaggacggtatggtaagttttatgcttgc
agtaattttcctgaatgccgcaatacgaaagctatcgtcaaagaaattggcgtcacttgt
ccgacatgtaaagaaggccaagtgattgaacggaaatcgaagaaaaatcggttgttttat
ggttgtgatcgttacccagcttgcgaattcgtttcatgggataaaccgattggcagaaac
tgtccaaaatgcgatcattatttagttgaaaagaaaactaaagggaaaaagcaagtgatt
tgcagtcactgtgagtataaagaagaagtacaataa
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