Carnobacterium sp. CP1: NY10_711
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Entry
NY10_711 CDS
T04230
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K18890
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
carc
Carnobacterium sp. CP1
Pathway
carc02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
carc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
NY10_711
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
carc02000
]
NY10_711
Transporters [BR:
carc02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
NY10_711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
MMR_HSR1
RsgA_GTPase
Gtr1_RagA
AAA_29
AAA_30
AAA_23
AAA_7
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
ALV21328
LinkDB
All DBs
Position
complement(670801..672546)
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AA seq
581 aa
AA seq
DB search
MKTIKMLWSYSMIKKWHFLIGMVLLVLAVATDLAGPLIIRRVIDDIIAPSLKGTLDVNLL
IQFLGLFLGLAVLTAIFRYLSFLALTIGANTVIRSMRDELYDHVQHLPIHFFDNLAAGKV
VSRITNDTEQLRIFYVIAVGQMLTNFCYLIGIYVALGRLNPVYGLAALALVPVFIFWAVI
YQKYAAPYNKKIRHLIGEVNGKLNESIQGMSIIQAFQQETTIEKEFDETNEEWFDYSQKF
TMLDSIASYSFVEVIKNFSLLLLVLYFGRGYLAGSLVVSVGLLYVFVDYTTRLFQPIQGI
VSQWAYLQTALVSAERIFELRETPMEVEEKKELILTKGEVTFDHVSFAYEEEKYVLNDIS
FTTKQGETVALVGHTGSGKSSIMNLLFRFYDPAKGAIYLDSVATTSVSRKSVRKQMGIVL
QDPYLFKGTIASNVSLGNKEITRERVRQAIEAVGGDILLQNMPQGIDEPVVDKGATLSSG
QRQLISFARALAFDPAILILDEATSNIDTETEEMIQHAMSVVKEGRTTFIIAHRLSTIQY
ADQILVMDKGMIAERGTHESLLKLNGQYAQMYRTQAKQKKA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgattaaaatgttgtggtcttattcaatgatcaaaaaatggcattttttaata
ggaatggttttattggtcttagcggtagccactgacttagcaggacctctgattatccgt
cgtgtgattgatgatatcatcgcgccttctttgaaagggacgcttgacgtaaatttgctg
attcaatttttaggattgtttctagggctggcggtgcttacggcaattttccgctacctt
agttttttagcgttgaccatcggagcaaataccgtgattcgatcaatgcgagacgaatta
tatgaccatgttcaacatttgccgattcatttttttgataatctagctgctgggaaagta
gtttcgcgtatcacgaatgatacggaacagctccgaattttttatgtcattgcggttggt
cagatgttgaccaatttctgttatttaatcggtatctatgtggctttaggccgtttaaat
cctgtttatggtttagctgcattagcgttggtacctgtctttattttttgggcagttatt
taccaaaaatatgcggcgccttacaataaaaaaatccgtcacttgattggcgaagttaat
ggcaagttaaacgaatcgattcagggaatgtctattatccaagcgtttcaacaagaaacg
acaattgaaaaagagtttgacgaaaccaacgaagaatggtttgattacagtcaaaagttt
actatgctggattcgatcgcttcttacagttttgtggaagtaatcaagaatttttcttta
ttgctgctagttttatactttggcagaggctatcttgctggttcattggttgttagtgta
gggctattatatgtttttgtcgattataccactcgcttatttcaaccgatacaaggaatt
gtttctcagtgggcttacctgcaaacggctttagtttctgctgaaagaatctttgagctg
cgtgaaacgccaatggaagttgaagaaaagaaagaattgattcttacaaaaggggaagtg
acttttgatcacgtttctttcgcatatgaggaagaaaagtacgttttaaacgacattagt
tttacaacaaaacaaggagaaaccgttgctttggttggacatactggctcaggaaaaagt
tcgatcatgaacttacttttccgtttttacgaccctgcaaaaggcgctatttatttagat
agtgtagcaacaacttctgtttcaagaaaaagcgttcgaaaacaaatgggaatcgttctg
caagatccttatttatttaaaggaacgattgcatcgaatgtttctttaggaaataaagaa
attacacgagaaagagtcagacaagctattgaagccgtaggaggggatattttattacag
aatatgccgcaaggaatagatgaaccggtagtggataaaggtgctactttatcttctgga
caacgacaattgatttcattcgcacgtgctttggcatttgacccggctattttgattttg
gatgaagcaacttcaaatattgatactgaaacagaagagatgattcagcatgcgatgtcg
gtggttaaagaaggcagaacgacattcattattgcccaccgtttatcgaccattcaatat
gcggaccaaatattggtgatggataaaggaatgattgctgaaagaggcacacatgaatca
cttttaaaattaaatggccagtatgctcagatgtaccggacacaagccaaacagaaaaaa
gcctag
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