Collimonas arenae: LT85_0083
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Entry
LT85_0083 CDS
T03512
Name
(GenBank) Transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_0083
Transcription factors [BR:
care03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LT85_0083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_24
TetR_C_6
TetR_C_41
Nmad5
HTH_11
HTH_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
AIY39243
UniProt:
A0A0A1F3G7
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Position
complement(98072..98692)
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AA seq
206 aa
AA seq
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MATTQRLTDRKREAIIRAAIAEFRSNGFETTSMDKIAARAEVSKRTVYNHFPGKEELFAE
ILTQLWQTSADQMALSYRADRPLREQLYELMQSKMRMLSDNNFLDLARVAIAATIHSPER
TQDMVARMNQREEGVNVWISAAQADGKLKPVDPAFAAHQLQSLLKTFAFWPQVTMDQPPL
SEAMQQQVLDSAVDMFLGYYQVAAKR
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggccacgacgcaacgcctcaccgaccgtaaacgggaggccatcatccgggcagcaatc
gccgaattccgcagcaacggcttcgaaaccaccagcatggacaagatcgccgcccgggcc
gaagtatccaaacgcacggtctacaaccattttccgggcaaggaagaattgttcgctgaa
atcctgacgcagttatggcagaccagcgctgaccagatggcgctcagctatcgtgccgac
cggccactgcgcgagcagctctacgagctgatgcaatccaagatgcgcatgctcagcgac
aacaatttcctcgacctggcgcgcgtggcgattgccgccaccattcactcgccagaacga
acgcaagatatggtcgccaggatgaaccagcgggaagaaggggttaacgtctggatcagc
gcggcgcaagccgatggcaagctgaagccggtcgatccggctttcgcggcgcatcagttg
caaagcttgttgaaaaccttcgcattctggccgcaggtcacgatggaccagccgccgctg
tcggaggcgatgcagcagcaggtgctggattcggcggtagatatgttcctggggtattac
caggttgcagcaaaacgctga
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