KEGG   Collimonas arenae: LT85_0168
Entry
LT85_0168         CDS       T03512                                 
Name
(GenBank) virulence associated protein C
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
care  Collimonas arenae
Brite
KEGG Orthology (KO) [BR:care00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:care03016]
    LT85_0168
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:care02048]
    LT85_0168
Transfer RNA biogenesis [BR:care03016]
 Prokaryotic type
  tRNA degradation factors
   LT85_0168
Prokaryotic defense system [BR:care02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    LT85_0168
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: AIY39328
UniProt: A0A0A1F3N9
LinkDB
Position
182000..182398
AA seq 132 aa
MLDTNMCIYLMKNQPREVAERFATCFVGDVVMSAITYAELEYGVAASANCARQRQNLAAL
IEDIPVAAFDSAAASAYGPIREATSERKKDHLDKLIAAHALALDVVLVTNNERDFANYPG
VKIENWITSGNG
NT seq 399 nt   +upstreamnt  +downstreamnt
atgctcgacaccaatatgtgcatctatctgatgaaaaatcagccgcgcgaggtcgctgag
cgtttcgccacttgcttcgtcggcgatgtggtgatgtcggcaattacctacgctgaactg
gaatacggcgtcgctgcctcggccaattgcgcgcgccagcggcagaacctggctgcgctg
atagaagatattcctgtcgctgcattcgatagtgcggcggccagtgcctacggtccgatc
cgcgaggccaccagcgagcgcaagaaagaccatctcgacaagttgatcgcagcgcatgcc
ctcgcgctcgacgtggtactggtgaccaacaacgagcgcgattttgcaaactaccctggc
gtgaagatagagaattggatcacatccggtaatggctga

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