Collimonas arenae: LT85_0213
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Entry
LT85_0213 CDS
T03512
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K02014
iron complex outermembrane recepter protein
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
care02000
]
LT85_0213
Transporters [BR:
care02000
]
Other transporters
Pores ion channels [TC:
1
]
LT85_0213
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl
DUF481
Motif
Other DBs
NCBI-ProteinID:
AIY39373
UniProt:
A0A0A1F3T2
LinkDB
All DBs
Position
complement(236042..238285)
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AA seq
747 aa
AA seq
DB search
MRCAHKMMLTLGVALPFGAAIAQTAGSAAPAATTATSATPATPQDTSSLQLETMTVTAQR
KVEKIKDVPISVTLLKGETLDVLNSGGQDIRVLAAKVPSLNIESSNGRTFPRFYIRGYGN
TDFSAFASQPVSLIYDDVVQENAALKGFPMFDMAGVEVLRGPQGTLFGRNTPAGVVKFDS
AKPSLDKVSGYYSVSDGTFNTANVEAAVNVPLSDQWAMRFSTLVEHRDDWITNNGGGPTG
SMGGYNERAGRLQFLYKPDGTFNALFNLHSRASEGNAQLFRANILQKGSDGFVAGFDPGT
VTTNAMNTQSLHTAGGSARLSWNLDQVKLYSITGYETISSYFSRGDIDGGTPTGPGFIPF
QVQTGGGIADHKQFSQEFRVESKNDGPLNWQTGLYYFYENVAGNSSNFDSNTQQQTSYLQ
NRQKNTAYAAFGSLTYDVNDRFKLRGGLRYTEDKKDFNNEVANNVTFTGPSSISESKSNV
SWDLSANYALNNDITTYARVATGFRAPSIAAPSSSVPITVANAETITSYEAGIKADLFNR
RARANFSVYTFDVKNQQLTAVGGASNSIMLVNAAKSVGHGAELDLEANLTEHLRMTFGGS
YNFTQIRDPNLLVAGCAACTMLNTQVRPGLYSIDGNPLPQAPKWIANITARYGIPLGNND
ELYFYTDWAYRSKINFFLYNSTEFTGKPLLEGGLRAGYKWDGDKYEIAAFARNITNKTVA
VGGIDFDNLTAFINEPRMFGVQFRSNF
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcgcacacaagatgatgctgacactgggagtcgccttgccattcggcgctgcc
atcgcgcagacggccggcagcgcggcgccggcggcaacaactgctacctcggccaccccg
gcgacgcctcaggatacatcgtccctgcagctggaaaccatgaccgtgaccgcgcaacgc
aaggtcgaaaaaatcaaggatgtgccgatctccgtgaccctgctcaagggcgagacgctt
gatgtccttaactccggcggccaggatatccgggtgctggcggccaaggtaccgagcctg
aacatcgaatcgtcgaacggccgcacctttccgcgcttttatatccgcggctacggcaat
accgatttttccgcctttgcctcacagccggtatccctgatatacgacgacgtggtgcag
gaaaacgccgcgctcaaaggcttcccgatgttcgacatggccggcgtggaagtgttgcgc
ggcccgcaaggcacgctgttcggccgcaatacgccggccggggtggtgaagttcgattcg
gcgaagcctagcctggataaggtatcgggttattacagcgtctccgacggtaccttcaac
accgccaacgtcgaggcggcggtcaatgtgccgctcagcgaccagtgggcgatgcgcttc
tccacattggtggagcatcgcgacgactggatcaccaacaacggcggcggcccgaccggc
agcatgggcggctacaacgaacgcgcaggacggctgcaattcctgtacaaaccggacggc
acgttcaatgccttgttcaacctgcattcgcgcgcctcggaaggtaacgcgcaattgttc
cgcgcgaacatcctgcagaagggcagcgacggtttcgtcgccggtttcgatccgggtacc
gtcaccaccaatgcgatgaacacgcaatcgctgcacaccgccggcggcagcgcgcgactg
tcgtggaacctggaccaggtcaagctgtattcgatcaccggctatgaaaccatttccagc
tatttcagccgcggcgatatcgatggcggcacgccaaccggcccgggcttcattccgttc
caggtacagaccggcggcggcatcgccgatcacaaacagttttcgcaagagttccgggtc
gaatcgaagaacgacgggccgctcaactggcaaaccggcttgtactatttctacgagaac
gtagccggcaacagctccaacttcgacagcaatacgcagcagcaaaccagttatctgcag
aatcgccagaagaataccgcctatgcggcattcggctcgctgacctatgacgtcaacgac
cgcttcaaactgcgcggcggcttgcggtataccgaggacaagaaggacttcaacaacgag
gtcgccaacaacgtgaccttcaccggcccaagctcgatcagcgagagcaaatcgaacgtc
agctgggacctcagcgccaactatgcactgaacaatgacatcacaacctatgcgcgggta
gccaccggtttccgtgcgccgagtattgcggcaccctcttcctcggtcccgatcactgtc
gccaatgccgaaaccattacctcttatgaagccgggatcaaggccgatctgttcaaccgc
cgcgcccgtgccaacttcagcgtctataccttcgacgtcaagaaccagcagctgaccgcg
gtgggcggcgcgtccaattcgatcatgctggtcaacgccgccaaaagcgtcggccacggc
gcagagctggatctggaagccaatctgactgagcacctgcgcatgactttcggcggcagc
tacaacttcacccagatccgcgatccgaacctgctggtggcgggctgcgccgcctgcacc
atgctcaatacccaggtacggccgggcttgtattcgatcgacggcaatcccttgccgcag
gcgcccaagtggatcgccaacatcactgcgcgctacggtatcccgctgggcaacaacgac
gaactgtacttctacaccgactgggcctaccgcagcaagatcaacttcttcctgtacaac
tccaccgagtttaccggcaagcctttgctggaaggcggcttgcgcgccggctacaaatgg
gatggcgacaaatatgaaatcgcagcgtttgcgcgaaacatcaccaacaagacggtggcg
gtgggcggtatcgatttcgacaacctgactgccttcatcaacgagccgcgcatgtttggc
gtgcagttccgttccaacttctga
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