KEGG   Collimonas arenae: LT85_0512
Entry
LT85_0512         CDS       T03512                                 
Name
(GenBank) Type III secretion inner membrane protein (YscQ,homologous to flagellar export components)
  KO
K03225  type III secretion protein Q
Organism
care  Collimonas arenae
Pathway
care03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:care00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LT85_0512
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:care02044]
    LT85_0512
Secretion system [BR:care02044]
 Type III secretion system
  Type III secretion core apparatus
   LT85_0512
SSDB
Motif
Pfam: FliMN_C DUF6315
Other DBs
NCBI-ProteinID: AIY39672
UniProt: A0A0A1FA06
LinkDB
Position
592072..593211
AA seq 379 aa
MPDVCIKLPHAGDAVAVAISAFASVSPGQAALSRRIGRGCHIRRSSAEGDIALSLFLANE
DTSKDALSGALTLAGPYGAIQLTQGVRVIRALCGIDLSDAPGDGDGDGAQWLRSAALGRL
QATPFAAATQLTRGAHTIFADGVALQLVVRSAQHAVISEIRAEASAMLAWLAAGGWRSVP
DAFERWAGLALSWPVTLASHVLPAAALASVQAGDVIVPATPRFLCRGEGDLGLGDIAARV
QYLAPCSLKIIILEKKLEQANYEQHLDQLNAKAASVPESTTTALPGADHDADSGLAAAAV
QQEEAVLDNVPVLLEFRMGQISMTFGELRTLAAGNILQINGGSPESVAIVASGRTLGRGE
LVEVGAQLGIRVVQWAGAC
NT seq 1140 nt   +upstreamnt  +downstreamnt
atgccagatgtttgtatcaagctgccccatgccggggatgcagttgcggttgcgatcagt
gcattcgccagcgtgtcgcccgggcaggcagcgctgtcgcgccggatcgggagggggtgc
catatccggcgctcgtctgccgaaggcgacattgcgctcagcttgttcctcgccaatgag
gatacgagtaaggacgccttgtccggtgccttgaccctggccggcccttacggcgcgatt
cagttgacccagggagtgcgcgttatacgggcgctgtgtgggatcgatctgagcgatgcg
ccgggcgatggtgatggcgacggcgcgcaatggttgcgatcggccgcgctggggcgcttg
caggcaacgccgtttgccgctgcaacccaactcactcgcggtgctcacacaatatttgcc
gacggcgtcgcgctgcaactggtggtgcgcagcgcgcagcacgcggtgatcagcgagata
cgggccgaggcctcggccatgctggcctggctagcggctggcggctggcgcagcgtgccg
gatgcattcgagcgctgggccggtctggcgctgtcgtggccggtcacgctggccagtcat
gtgctgcctgcggcggcgctggctagcgttcaggccggcgatgtgatcgtgccggcgacg
ccgcgcttcttgtgccgcggtgaaggcgatctcggtttgggagacatcgctgcccgggtt
caatatctcgcgccttgctcgctgaaaatcatcattctggagaaaaaattggaacaagcc
aactacgaacaacaccttgatcagttgaacgccaaggccgcaagcgtgcctgaatcgact
acaacagcacttcccggcgcggatcatgatgcggattccggtctggcagcggccgctgtg
cagcaggaggaagcagtgctggacaacgtgccggtgctgctggagtttcgcatgggacaa
atttcgatgacctttggcgagctgcgcacgctggcggccggcaatatcctgcagattaac
ggcggctctccggaatcggtggcgattgtcgcgtcgggccgcacgctggggcgcggcgag
ctggtcgaggtcggcgcgcaactcgggattcgcgtcgtgcagtgggccggagcatgctga

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