Collimonas arenae: LT85_0640
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Entry
LT85_0640 CDS
T03512
Name
(GenBank) Putative oxidoreductase in 4-hydroxyproline catabolic gene cluster
KO
K22549
D-hydroxyproline dehydrogenase subunit alpha [EC:1.5.99.-]
Organism
care
Collimonas arenae
Pathway
care00470
D-Amino acid metabolism
care01100
Metabolic pathways
Module
care_M00948
Hydroxyproline degradation, trans-4-hydroxy-L-proline => 2-oxoglutarate
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LT85_0640
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
FAD_oxidored
NAD_binding_8
Thi4
FAD_binding_2
HI0933_like
DAO
GIDA
Pyr_redox_3
FAD_binding_3
AlaDh_PNT_C
Pyr_redox
Lycopene_cycl
NAD_binding_9
UDPG_MGDP_dh_N
XdhC_C
MurD-like_N
3HCDH_N
Staph_opine_DH
Motif
Other DBs
NCBI-ProteinID:
AIY39800
UniProt:
A0A0A1F7P8
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Position
718929..720206
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AA seq
425 aa
AA seq
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MMHAADIVIIGAGPAGLAAARSAAQRGVTVALVDDNPLAGGQIWRGGPQHSQHPQAGKLW
AELQQMANVQWFMQSRVVGQAAAAQLLLETPQQTFKLAYRKLILATGARERLLPFPGWTL
PGVTGAGGLQALVKGGYPVRGKRIVVAGSGPLLLAVAATLRQHGAQVLHVLEQSSRRKLA
GFALQLVRTPEKLRQAWQLRSQLAGVPYHAGSYVLQALGEQQLRAVQVTIAERRLSIECD
YLACGYGLLPNTELAQALGCRIADSAIQVNEHQQTSIENVYCAGEGTGVGGVDLALAEGH
IAGGQAAALGPPAQRWLTQRRAQQAFAERLQDAFALRPELRRLCDPDTLVCRCEDVAYAD
LQAHASWRSAKLQTRCGMGPCQGRVCGGASDFLFGWKPDSVRLPISPARISSLITLHSTS
PVDGD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacgctgccgacatagtgatcatcggcgccgggccggccgggctggcggccgcc
agaagcgcagcgcaaagaggcgttaccgtggcattggtggatgacaatccactggccggc
ggtcagatctggcgcggcggaccgcaacacagccagcatccccaggctggaaagctgtgg
gccgaactgcagcaaatggccaacgtgcaatggttcatgcaaagccgcgtagttggacag
gcagcggcggcgcaactgttgctggaaacaccgcagcagacgttcaagctggcctatcgc
aaattgatactggccacaggtgcacgcgagcggctgttgccgtttcccggctggacgctg
cccggcgtcaccggtgccggcggtttgcaagcgctggtcaaaggcggttatccggtgcgc
ggcaagcgtatcgtcgtcgccggttcaggaccgttgttgctggctgtggcggcgactttg
cggcagcatggcgcacaggtgctgcatgtgctggagcaaagcagccggcgcaagctggcg
ggttttgcgctgcaactggtgcgtactcctgaaaaattgcggcaggcctggcaattgcgc
agtcagctggcgggtgtgccgtatcacgctggcagctatgtgttgcaagcgctgggcgag
cagcagttgcgagcggtgcaggtgacgatagcggagcggaggctcagcatagagtgcgat
tacctggcttgcggctatggcttgttgcccaatactgaactggcgcaggcgctcggctgt
cgcatcgcggatagcgcaatacaggtcaatgaacatcagcaaacaagcatcgaaaacgtt
tactgcgcaggagagggaaccggcgtaggcggcgtcgatctggcgctggccgaaggtcat
atcgctggtggacaagccgctgctcttggcccgcctgcgcagcgctggctgacgcagcgc
cgtgcacaacaggctttcgccgagcgtctgcaggatgcatttgctttacgcccggagctg
cgtcgtttgtgtgatcccgatacgttggtttgccgttgcgaagatgttgcttatgccgat
ttgcaggcgcacgctagctggcgtagtgcgaaattgcaaacgcgttgcggcatgggaccg
tgccaaggcagggtttgcggcggcgccagcgacttcttgttcggttggaagccggattcg
gtgcgcttgccaatttcaccagcgcgcatctccagtctgattacattgcatagtacctct
cctgtagatggagattag
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