Collimonas arenae: LT85_0680
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Entry
LT85_0680 CDS
T03512
Name
(GenBank) Hypothetical ATP-binding protein UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
care03019
]
LT85_0680
Messenger RNA biogenesis [BR:
care03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LT85_0680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_18
Rad17
HTH_11
AAA_28
AAA_22
AAA_16
HTH_DeoR
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AIY39840
UniProt:
A0A0A1F7S9
LinkDB
All DBs
Position
complement(760485..761366)
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AA seq
293 aa
AA seq
DB search
MRIILITGISGSGKSVALRVLEDAGYFCVDNLPPVLLRDLVATRQHEGAQMLAVATDARS
ADSLAGLPSDIQQLRAEGHDVKVFFLTAQTESLIARFSETRRSHPLSHRLRPGQNPSDRL
TLTECIQIEREMLVEIESIGHTIDTSDMSANRLRSWIKELVDTEPAPLTLLFESFAFKRG
VPLDADLVFDVRMLPNPHYDVKLRPLTGRDQPVIAFLEDLPRVTDLLSDIRNFVEKWLPE
FKNDNRSYLTVAIGCTGGQHRSVYMVEQLAEYFQVSERVVRRHRELAKRAGEH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcttattactggaatttccggctccggcaaatcggtcgctcttcgggta
ctcgaagatgcgggttatttttgcgtcgacaacctgccgccagtgctgctgcgcgatttg
gtcgccacccgccagcatgaaggtgcgcaaatgctcgccgtcgccaccgatgcccgtagt
gcggattcgttggctggcctgccgagcgatatccagcaattgcgcgccgaaggacacgac
gtcaaggtgtttttcctgacggcgcagaccgaatccctgatcgcacgtttttccgagacc
cgccgcagccatccgctatcgcatcggttgcggcccggccaaaatccgagcgaccgcctg
accttgaccgagtgtatccagatcgagcgtgagatgctggtcgaaatcgagagtatcggc
cataccatcgacacctccgacatgagcgccaaccgtttgcgcagctggatcaaggagctg
gtcgacaccgaaccggcgccgttgaccttgctgttcgaatcgttcgcgttcaagcgcggc
gtgccgctggatgccgatctggtattcgatgtgcggatgctgccaaatccccattacgac
gtgaaattgcggccgctgaccgggcgcgatcagcccgtaatcgcttttctggaagacctg
ccccgggtcaccgacctgttgagcgacattcgcaattttgtcgaaaaatggctgcctgag
ttcaagaacgataatcgcagctatctgacggtggcaatcggctgcaccggcggccagcat
cgttcggtatacatggtcgagcagttggcggaatacttccaggtctccgagcgcgtagta
cgtcgccatcgcgaactggccaagcgcgccggcgagcactaa
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