Collimonas arenae: LT85_0826
Help
Entry
LT85_0826 CDS
T03512
Name
(GenBank) Transcriptional regulator
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
care03000
]
LT85_0826
Transcription factors [BR:
care03000
]
Prokaryotic type
Helix-turn-helix
LacI family
LT85_0826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
ANF_receptor
HTH_3
Motif
Other DBs
NCBI-ProteinID:
AIY39986
UniProt:
A0A0A1F624
LinkDB
All DBs
Position
complement(935470..936543)
Genome browser
AA seq
357 aa
AA seq
DB search
MEKETLLDAVVADVTARRKGGRKTGGFTLRDVAKLAGVAPITASRALNTPDAVSAKVLQK
VQAAVQQTGYVPNLLAGALASQKSRLVAAVVPTLSGPMFLETVESLTDTLAGAGYQVMLG
QSGYENSREDALLDAIIGRRPDGIVLTGINRSAQARRRLLASGIPVVETWDLTPTPVDML
VGFSHEKIGAAVAQYLHAAGRRRVGAICANDDRSRRRANAFSQEAIRLGMAMAQETEIPS
CEVAAPTTLGNGRSGLRALLARAPDIDAVFCSSDLLALGVMIEAQASGISIPKQLAVIGL
GDLSFSLDLQPPLTTVRIDGTAIGSTAARFIIARSEGKNVAEPICDIGFSIIERASV
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagaaactctactggatgcagtcgtcgccgatgtcaccgcccgccgcaaaggc
ggccgcaagaccggaggattcaccttgcgcgacgtcgccaaactggccggcgtggcccca
atcaccgcttcgcgcgcgctcaacacgccggatgcggtttccgccaaggtgttgcaaaaa
gtacaggccgcagtacagcaaaccggttacgtaccaaacttgctcgcaggtgcactagcg
tcgcaaaaaagccgcttggtggcagccgttgtgcctaccttgtccggcccgatgttcctg
gaaaccgtggaatcgctgacagacactttggcaggagcaggctatcaggtcatgctgggt
caaagcggttatgaaaattcgcgcgaagatgcgctgctggacgccatcatcggccgccgt
cctgacggcattgtgctgaccggcatcaaccgttccgcgcaggcgcggcgacgcttgctc
gcgagcggcattccggtcgtagaaacctgggatctgacgccgaccccggtcgacatgctg
gtcggtttttcccatgaaaagatcggcgcggcggtagctcagtacctgcacgcggccggc
cgccgccgggtaggcgccatctgcgccaacgacgaccgtagccgtcgccgcgccaacgcc
ttctcccaagaagcgatccggcttggcatggctatggcgcaagaaaccgagataccttcc
tgcgaagtggcggcccctaccacgctcggcaacggtcgcagcggcctgcgggcattgcta
gcccgcgcacccgatatcgacgccgtgttttgcagttcagacctgctcgctttgggcgtg
atgattgaagcccaagccagcggtataagcattcccaaacaactggccgtcatcggcctg
ggcgacctgagtttttcactcgacttgcaaccgccgctgaccacggtgcgcatcgacggc
accgctatcggcagcacagcggcgcgctttatcatcgcccgctccgaaggaaaaaacgtc
gccgaaccgatctgcgatatcggcttcagcatcatagagcgcgccagcgtttaa
DBGET
integrated database retrieval system
