Collimonas arenae: LT85_0894
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Entry
LT85_0894 CDS
T03512
Symbol
rfbF
Name
(GenBank) dTDP-rhamnosyl transferase RfbF
KO
K12990
rhamnosyltransferase [EC:2.4.1.-]
Organism
care
Collimonas arenae
Pathway
care02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
care00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LT85_0894 (rfbF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
care01005
]
LT85_0894 (rfbF)
Lipopolysaccharide biosynthesis proteins [BR:
care01005
]
O-antigen repeat unit
LT85_0894 (rfbF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Microp_apicomplexa_11
Motif
Other DBs
NCBI-ProteinID:
AIY40054
UniProt:
A0A0A1F8Q0
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All DBs
Position
1007473..1008396
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AA seq
307 aa
AA seq
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MTQLNKTGVAAIVVGYFPEYKIVVNLLKSLSSQVDYLILVDNGGTKEAYDFAQKEGLDIE
YIQFEKNKGLGHALNMGFERAISLGVKYVATFDQDSAPTADLIGNLKKTHEKFALEGVNC
AAVGPVFFDRRESNKTYFPFYLEEKGKIISRLPNNCSESYVETDALITSGMLVRADVWEN
GVHYDAGLFVDYTDTEWSFRARAKGYKLFGCLRIEMGHAPSDAPPARIFGLSFFRYSPLR
RFYYFRNTVSFCRASYVSWTWKRRLTYGLTLRFFINILIDEKKLRSLKMMLVGICDGIRR
KSGEFIG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgacacaattaaataaaacaggtgttgcagcaatagttgtcggctattttcctgaatac
aaaattgtagttaatctcctgaagtctttatcgtcacaggtcgattatttgattttggtc
gataatggtggaacgaaggaggcttacgattttgcacagaaagaaggtctggatattgaa
tatatacaatttgaaaaaaacaaagggcttgggcatgctctgaatatgggatttgagcgt
gcgataagcttgggagtgaagtatgtggccacttttgatcaggatagtgctccaactgct
gaccttatcggaaatctcaagaaaactcatgaaaaatttgcattagagggagttaattgt
gctgcggttggtccagttttcttcgaccgccgtgagtccaataaaacctatttcccattt
tatcttgaggagaaggggaaaattatatcgagattgcctaataactgttccgaaagttat
gtcgaaactgatgcattgattacttctggtatgttagtgcgagccgatgtttgggaaaat
ggcgtccattatgatgctggtttgtttgtggattatacagatactgaatggagctttcgc
gccagagcaaaaggttataaattgtttggatgtctaagaattgaaatgggacatgcgcca
tcggatgctccacccgctcgtatatttggattgagttttttcagatactctccattgcgt
cgcttttattattttcggaatacagtaagtttttgccgggccagttatgtttcctggaca
tggaagcgccgtttaacttatggtttaactctccgattttttatcaatattttaattgat
gaaaagaaattacgtagtttgaaaatgatgcttgtaggtatttgcgatggcatacgccgc
aagtcaggcgaatttattggatga
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