Collimonas arenae: LT85_0920
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Entry
LT85_0920 CDS
T03512
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
care
Collimonas arenae
Pathway
care00540
Lipopolysaccharide biosynthesis
care01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
care00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
LT85_0920
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
care01005
]
LT85_0920
Enzymes [BR:
care01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
LT85_0920
Lipopolysaccharide biosynthesis proteins [BR:
care01005
]
Core region
LT85_0920
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
AIY40078
UniProt:
A0A0A1F5U1
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Position
1037833..1039086
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AA seq
417 aa
AA seq
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MRYSKLLVTALLIAFYILALVVDRSAGVIFGLLLLFGLVFLVSGKKANDKSFVQLVKEYW
PLHLTMCAWLIAVLANQIGSGHFLWRTYDPPFRLAMFVLVFWVMSFLSIRYMKYVQWAWV
IGAFLSAVKIHVLTGGGAMRYGSDFIPIIIFGELTLLLGIFSALSIVWNKPENKIAIFFK
IAALCAGLYAAYLSQSRGVWLTIFVFIAIALLVTKNIRSSYKLSVVISFVVFLGAISYFG
NIVKERVLIGESDITQYSAGKNIDTSLGTRLQLWHGSWVLFTEHPLTGVGVEGFPLALEE
LSKRNIITPLSATFPHSHNEILFMMSKLGLFGLFTILALYCTPAYYFFRNIRNNDSEIRY
IAAMGLALCLGFFTLGLVDVVFLWWEVYPYYTISIAFFLIYIMKRKEFLDKPKESHQ
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttgcgttactcgaaattgctggttactgccttattgattgcattttatatactggcatta
gttgtagatcgatctgccggggtgatttttggcctgttgttattatttggcctagttttc
ctagtatctgggaaaaaagcgaatgataaatcattcgttcagttagtaaaagaatactgg
ccgcttcatctgacaatgtgcgcctggctaattgctgtattggctaatcagattggatcc
ggtcattttctatggcgaacatatgatcccccattccggctagcgatgttcgtcctggtt
ttctgggtaatgtcctttctgtctatcagatacatgaagtacgttcagtgggcttgggtg
ataggagcattcctgtcggcggttaaaatccatgtgcttactggcggcggggcaatgcgt
tacggatcggattttattcccattattatctttggtgaactcaccttactgctaggaatt
ttctctgctttatctatcgtttggaataagccagagaacaaaattgctatttttttcaaa
atagcggcgctgtgtgccggattatatgccgcatatttatcacaatcgcgcggtgtatgg
ttgaccatttttgtatttattgccatagcacttttagtgaccaaaaatattcgttccagc
tataaattgtcagtcgtcatttcttttgttgtttttttgggtgcaatatcttattttgga
aatattgtaaaagaacgagttctgattggggaaagcgatatcacgcaatattctgcgggg
aaaaatatcgatacttctttggggacgcgtctccaactctggcacggttcttgggtattg
ttcaccgaacatccactcacaggagttggtgtggagggttttccactggcattggaagaa
ctttccaagcgaaatattattactcctctttctgcaactttcccgcactctcacaatgaa
atattgtttatgatgtcgaagcttggtttgtttggattatttacaatactagcattgtac
tgcacaccagcttattatttctttcgcaatatacgtaataatgattcagaaattcgttat
atagctgcaatgggtcttgcattgtgccttggattttttacattgggattagtcgatgtt
gtatttttgtggtgggaagtttatccttattacactataagcatagcttttttcttaata
tatattatgaagagaaaagaatttctagataagccaaaagaatcgcatcaataa
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