Collimonas arenae: LT85_1050
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Entry
LT85_1050 CDS
T03512
Name
(GenBank) Helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
care
Collimonas arenae
Brite
KEGG Orthology (KO) [BR:
care00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
care03400
]
LT85_1050
Enzymes [BR:
care01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LT85_1050
DNA repair and recombination proteins [BR:
care03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LT85_1050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Motif
Other DBs
NCBI-ProteinID:
AIY40208
UniProt:
A0A0A1F689
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All DBs
Position
1182467..1185139
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AA seq
890 aa
AA seq
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MLTACRNNGSDGGADMRDFSHWRVILPTFAHAQALKAAMTAQLGGTFLPPQFFTLSGLLM
TMPPLPNVLPASERLMRLYAELRQHGWLKKLFTARRNTDLLPLAQTLLALSDELTQAMLP
SLHAGDDSNDTEQRWQTALEQLSPDARKLLSDETQLVWSIWKSQLDADDAIAARFTQMLQ
LAENASQPLIWISSVAPEPLEQAFLEAYAQHQQVLTMTLDWRASALLPTYTLAWPEMIEA
AVGAEPQTSTDYSLSTELALCAAQSVEDEAVQGAQIVIDWLQAGKTNLAIVAQDRVVARR
IRALLERAQIHVADETGWKLSTTRAASAISAWFDVITARGETTALLDLLKSPFVLNEAPS
DLLHDAQDSIANKSALVMKIEILLRRANVLGEWRAVTNALSAAPAEQKTVALLAQQAGLF
GGRKNLRDWIATTTSALDTLGIASALSADSAGQQILQLLQNIAPPGNDFSALFSFSEWRA
LVNLQLDDTSFISAINDRRVVMLPLNGARLRVFEAVLVVGADADHLPSQPQETLFFANTV
RRELGLATRESRQRQQLRDVVELLAMNSQVVLSWQAHKDGEPNPVSPWIQRLQLTLARAG
VQPLPELRATIARQSLQPTPSTMPVPAAAELTPTRLTASAYNSFIACPYQFFARRMLGLA
SLDELSDLPEKRDYGGWLHEILETYHESLRDAPLPPHQREALLVAISKKLFDAVISKNAA
ALGYYARWQKVIAPYVAWANEHEAAGWRFVFGEQAYEKLLPLADRNLILHGRIDRIDEND
AGERAVLDYKTNNLLALNKKLKDHEDHQLAFYGLLSDRPVASAHYVALETSKDKVGDVSA
PDYDQAQAALATQITVNVEAIARGVGLPANGVASVCQYCDVRGLCRKGAW
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
ttgctgacggcttgccgcaacaatggaagcgacggcggcgctgacatgcgcgatttttca
cactggcgcgtgatattgccaacctttgcccacgcccaggcgctgaaagccgcgatgact
gcgcaactgggcggaacctttttgccgccgcaattttttaccctgtcaggcctgttgatg
acgatgccgccgctgccgaacgtgctgccggccagcgagcgtttgatgcgcctgtacgcc
gagctgcgccagcatggctggctgaagaaattattcactgcgcgccgcaacactgatctg
ctgccgctggcccagaccttgttagcgctatcagatgaattgacgcaagctatgctgcca
tcgctgcacgctggcgacgatagcaacgacacggaacagcgctggcaaaccgcgctggaa
cagttgtcgccggatgcgcgcaagttgctgtcggatgaaacccaactggtctggtcgatc
tggaaaagccagctggatgccgacgacgcgattgcggcccgcttcacgcaaatgctgcag
ctggccgagaacgccagccagccattgatatggatcagttcggtggcgccggaaccgctg
gagcaggcttttctcgaagcctatgcgcaacatcagcaagtgctgacgatgacgctcgat
tggcgtgcgtccgctttgttgccgacttatacgctggcgtggccggagatgatcgaagca
gctgtcggcgcggagccgcaaacatcgaccgattattctctttcaaccgagctggcgctg
tgcgctgcgcagagcgtcgaagatgaagccgtgcagggtgcgcaaatcgtgattgactgg
ctacaggccggaaaaaccaatctggctatcgtggcgcaggaccgggtggtggctcggcgt
atccgcgctttgctggaacgagcgcaaatccatgttgccgatgaaaccggctggaagctc
tccaccacccgcgccgcatcggcgatctcggcgtggttcgacgtgatcaccgcgcgcggg
gaaacaactgccttgctggatttgctgaagtcgccgtttgtgctgaacgaagcacccagc
gacttgctgcacgatgcacaggacagtatcgcgaacaaatcggcgctggtcatgaaaata
gaaatactgctgcggcgcgccaacgtgctcggcgagtggcgtgcagtaaccaacgcactc
agcgctgcgccggcagagcaaaagacagtggccttgctggcgcagcaggccggcctgttt
ggcggccgcaagaatttgcgcgactggatcgccaccaccacatcggcgctggatacgctg
gggatcgcatccgcgctgagcgccgattcagcaggccagcagatattgcaactgctgcaa
aatatcgcgccgccgggcaacgatttcagtgcgctgttttcattttcagaatggcgcgca
ctggtcaatctgcaactcgacgacaccagtttcatcagcgccatcaacgaccgccgcgta
gtgatgctgccgctgaacggtgcccgcttgcgcgtttttgaagcagtgctggtagttggc
gccgacgccgatcacttgccgtcgcagccgcaggaaacgctgttctttgccaatacagtg
cggcgtgagctcggcctggcgacgcgcgagagccggcaacgccagcaattgcgcgacgtg
gtcgaactgctggccatgaattcgcaagtggtgttgtcctggcaggcgcacaaggatgga
gaaccgaatccggtcagcccctggatccagcgcctgcagctgactttggcgcgcgcaggg
gtgcagcctttgccggagctgcgtgcgacgattgcaaggcagagcttgcagccgacgcca
tcaacgatgccagttcctgccgctgcggaattgacgccaacgcgtctgactgccagtgct
tacaacagcttcatcgcctgcccctatcaattctttgcgcgtcgcatgctgggcttggcc
tcgctggatgaactgtcggatttgccggaaaagcgcgactacggcggatggctgcatgaa
attctcgagacttatcacgaatccttgagagatgcgccgttgccgccacatcagcgcgaa
gctttgctggttgctatatcaaaaaaactgttcgatgccgtcatcagcaagaatgcagct
gcattgggttattacgcacgctggcaaaaagtgatcgcgccgtatgtggcgtgggccaat
gagcacgaagcagcaggctggcgctttgtcttcggcgaacaagcgtatgagaaactgctg
ccactggcggatcgcaacctgatcttgcatggccgcatcgaccgcattgacgaaaacgat
gctggcgaacgtgcggtgctggactacaagacgaacaacctgttggcgctgaacaaaaaa
ctgaaagaccatgaagatcatcaactggcgttctacggcttgctgtctgaccggcctgtg
gcgtcggcgcactatgtcgccctcgaaaccagcaaggataaggtcggcgacgtcagcgca
ccagattacgatcaggcgcaagccgcgctcgctacgcagatcaccgtcaacgtcgaggcc
attgctcgcggtgtcggcctgccagccaatggcgttgcttcggtgtgccagtattgcgat
gtacgcggcttgtgccgcaagggagcatggtaa
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